Gene detail

Detailed information of BRAKERNUSP00000041873.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015758485.1, PREDICTED: NFX1-type zinc finger-containing protein 1-like isoform X2 [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000041873

ATGCTTTGCGATTTCTGCAACGAGAAGGCTTGTATGACATGTTCACGTTGTAATTTTGCGAGATACTGCTCTACGGACCATCGAAAACAAGATTGGAAATTTCATCAAAGAAGATGTGTAGGACGATCTGGACAACGGTCCTTGGTACAAGAAACTTGTCGAAATGGATCTCCATTGAACGGTGAGCGTGTATATACAGACTTATATCAAAATGGTGTTTCAGAGCAAGCGGTTCAGGTTGTTGAAGAACTTAGAAAACAAGGGTACTGTTATATCGATACATTTCATGGAGAAGAAATTGCAAAGAGTATTCTAAGTGAAGTTAAAAGCTTACATCACAGACAAAAGTTTACAGATGGGGAATTGGTCTCTTCGAATGGTAACGGCAGTACGTTGAACAAGAAAATACGGGACGACAAAATTACGTGGGTcgatggaaaagaaaaacattgtgAAACTatttcctatcacatgaatGCTGTTAATTCGTTGATAAGAAAGTGCAACGAATTGATTGAGGAATATGAAATCGAGCATAGGACAAAGGCTATGGTTGCTTGCTATCCTGGCCAAGGAACTGGGTATAAGAGACATGTGGATAATCCTAGTCAAGATGGCCGGTGTATAACAACACTATATTATCTTAACCCTGGATGGTCAGAAGAGAAAGGAGGTATATTAAAATTGTATCCTGGTGGTGGAGAGCAAGCGGTTCGTATTTTGCCCATTCTGGACAGGTTGTTACTGTTCTGGTCAGATCGCAGGAACCCTCATGAAGTCGAACCATCCCATGATGTCAGATATGCCATCACACTTTGGTACTTTGACAAGAATGAAAGAGCCTTGTTCAAAGAGAAGCAAGAGGCCTTAAGAAAGCAAGAATCAAAGGGCAAGGCAAAGcTGCTGGAGACGTTGCAGAAAAATGCTTTGATCACTCTGGCTTCGAGACACTGCGAAATCTGGAAGAAGATAGTAACTGAATTAAAGGCCACTGGTGGCATCGGAGGCGCTCTTCCCCTTGTTTGCCAAATCCATAATGAAGAAGTAACAGCAGAAACAGCCGACGATTTTAGCCAGAAAGTTCCCGACGGAGGATGCTCTCGAATTTGCGGAATGCGGTTAAAATGCGGCCATGCATGCAAGCAGTTCTGTCATCCACGTGACAAGGGGCACGAGAAATACGTCTGCCGTGAGGCATGTGCGAGATTCGTCAGTGGTTGCACTCAGCACTTGTGTTCAAACCGTTGCAATGAGAGTTGTGTCTGGCCGTGCAAGGAGGAAGTTGAAAAACCGTTGCCAGTTTGTGGCCACATAGTGAAAACGGAATGCTGCCGAACTGATTTGGAAGGTGTTCCTTGCAAAGAACAGTGTAGCAAGATTCTTAAGTGTGGTCACAACTGTCAAAATTACTGCAACAAGCCATGCACCACCGAATGCAAAGAGCTAGTGAAGAAAAACGACTGGCCATGTGGGCATGTCGTCACTATTGCCTGCTGTGCCACTCCAGATCAATGCCCAGTCCCTTGTCAGGCCAACCTAGAATGTGGTCACCAGTGCCCCGGAACGTGTGGCGAGTGTCGAATGGGTCGAATCCACAAGCGATGTAGACTCAAATGCGGCCGCGTGTCAGTTTGTTCCCACGCATGCAGAGAGGGCTGTGCCGAGCCATGTCCACCGTGTGCCAGACCATGTGAAAATCGCTGCGCACACAGCAAGTGCGACAAGAAGTGTGGTGAGCTCTGCATATCCTGCAATGAGAAGTGCTCCTGGGTATGTCGACATTACGGATGTCACAATCTATGTCACGAGATCTGTGACAGACCAAGATGCAACGAACCTTGCCAAAGAATTCTTAAGTGCCGTCATATTTGCCGGGGGTTGATGTGCGAAGAATACCACAAATGCATCTGTGCCGTTTGCACGAAAAACGACGGAATGGACCCAATTACAGATCTTTTCCTAGGTGGAGAGGACGATGAAGGTGCACTCTTTATCAGGCTCCCAGATTGTGGACATATCTTTGCAGTGTCAGACCTTGACAGGTACATGGACATGCAGAATGATACACTTGAGAGACATGAGATTCAGATGAAAAGATGCCCACGTTGTAATACCACGATCCGTCTGAGCATGCGATATGGTAACATCATTAAACAGCAGCTTCGAGACATAGAGAAAGTGAAGAAGGCAATGCATGAGAAAACGAGTGGCGAACTTTCAAAGAAATTACGACTTCTCCTTTATCGTTTAGGACAGTTGTCATGCAAGATCGGTGCAGAAATTTATTCAAATGTGTGGCTGCCACTATGGGGCAAAATCATCAACGGCTCAATGGCTGCACTATTTGAAAACAAGGTTATGCTGATGGAACGTTTCTGCCTGTTAACggaaaagatgaaagaaaatcCAGATCTCCCTGTGGATATCTGCCAGGAAAACAAATTCGATTGGCATTGTCTTGTCAGTGACTTATCCTACCTCTATAAACGTTTTATGTATGGCCAAGTGACTCAACGAGAATTGCAAGACATAAACACAGAATTCTCCAGGATTAATCTCCAAGTCGAGCTTTGCTTATTGAGTCGCGACGTCAAAGGCCTGGACCTAGAAGAGAAGGAGAGCCAAGTGATGTCTGAGGTCCGCGAGAAATTGTCCAGCGTGGAACGCATAAAAGACGAGATTCTCGAGGGGCTGTTGAAAAGCTTAGCAACTATTAGGAAGAGTTACCCTTCTCTTAATTCGTTGACCCCAGAGGAAAAGAAACAGATCGTGTCTGCGATGGGTCTGAAGAAAGGTCATTGGTTCAAATGTCCCAACGACCACGTTTACTGTATTACTGAGTGTGGTGGAGCTATGGAGAGAAGCACTTGTCCTGAATGCAAAGCTGTGATAGGTGGACAAAACCACAAACTCGAAGAGGGCAATACGTTGGCTCCCGAGATGGATAACGCACAATACCCGGCATGGTCTGAGCAGGCAAACATGCAAAATTATGATTTGCGATGA

Transcript

BRAKERNUST00000041873

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8R151	NFX1-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Znfx1 PE=1 SV=3
Q9P2E3	NFX1-type zinc finger-containing protein 1 OS=Homo sapiens OX=9606 GN=ZNFX1 PE=1 SV=2
P59722	Egl nine homolog 1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Egln1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001316 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640 all species →	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan
PF20173 all species →	ZnF_RZ-type	RZ type zinc finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044862 all species →	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR046439 all species →	Domain	Zinc finger, RZ-type	Interproscan
IPR002893 all species →	Domain	Zinc finger, MYND-type	Interproscan
IPR006620 all species →	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan
IPR005123 all species →	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR051559 all species →	Family	Hypoxia-inducible factor prolyl hydroxylases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12907 all species →	EGL NINE HOMOLOG-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan
GO:0008198 all species →	Molecular Function	ferrous iron binding	Interproscan
GO:0031543 all species →	Molecular Function	peptidyl-proline dioxygenase activity	Interproscan
GO:0071456 all species →	Biological Process	cellular response to hypoxia	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000041873.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.