Gene detail

Detailed information of BRAKERNUSP00000042062.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015771944.1, PREDICTED: beta-hexosaminidase 1-like [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7WM73	Beta-hexosaminidase 1 OS=Arabidopsis thaliana OX=3702 GN=HEXO1 PE=1 SV=1
Q8L7S6	Beta-hexosaminidase 3 OS=Arabidopsis thaliana OX=3702 GN=HEXO3 PE=1 SV=1
Q54K56	Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum OX=44689 GN=hexb2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001007 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00728 all species →	Glyco_hydro_20	Glycosyl hydrolase family 20, catalytic domain	Domain	Interproscan
PF14845 all species →	Glycohydro_20b2	beta-acetyl hexosaminidase like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029018 all species →	Homologous_superfamily	Beta-hexosaminidase-like, domain 2	Interproscan
IPR025705 all species →	Family	Beta-hexosaminidase	Interproscan
IPR015883 all species →	Domain	Glycoside hydrolase family 20, catalytic domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR029019 all species →	Domain	Beta-hexosaminidase, eukaryotic type, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22600 all species →	BETA-HEXOSAMINIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004563 all species →	Molecular Function	beta-N-acetylhexosaminidase activity	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0030203 all species →	Biological Process	glycosaminoglycan metabolic process	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000042062.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.