Detailed information of BRAKERNUSP00000042317.1 in Montipora cactus

Genomic Location: BLFO01003851.1:249742...251514
NR annotation: XP_044178013.1, 5'-3' exoribonuclease 1-like isoform X4 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IZH25'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 SV=1
P977895'-3' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Xrn1 PE=1 SV=1
P221475'-3' exoribonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=XRN1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001137 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03159
all species →
XRN_NXRN 5'-3' exonuclease N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004859
all species →
DomainXrn1, N-terminalInterproscan
IPR027073
all species →
Family5'-3' exoribonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12341
all species →
5'->3' EXORIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0004527
all species →
Molecular Functionexonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000042317.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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