Gene detail

Detailed information of BRAKERNUSP00000043044.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029202743.2, uncharacterized protein LOC114966925 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000043044

ATGAATAGTTTCTGCGTTACGCTCTTGCTTTTAGGGACATTGGCAAGCTTAGTGCCAGAAAGCTCTTCTTGGTGGAGTTCGGGAAAACCTCGTCCGGTAGATGGACAATGGAGTGCTTGGACAGAATGGAGCACTTGCCAAATCCCTTCAAATCCGGACTCGTTGCCTTTTCGgtataaagaaagaaattgttCAAATCCTGCTCCTAAAAACGGGGGCGCCAATTGTAAAGGAGAAAGTCAACGAAATTCGAGCTGTTACGACTGCAATATGCCTTTGGGTTTAGAGAGTGGTCGTGTACAAGATTCCTACATCAGAGCATCGCATTCTCACAAATATTTTCCATCATACCACGCTAGATTGAACAGTAAATCGGCTTGGTGTTCCATGAATCCCGATACTTTAGAAGAACGGCTATACCTCCAAATCGATCTGAGAAAATTGACCGCGGTTTCTGCAATAGCATCGCAAGGGTTTTATCCTCCGGCAGAAGAAATGTCACTTCGTATGGGTCGCGTGAGCAAGTACAAACTTATGTACAGTACAAATGGGCTTTCTTGGAGTTCGTACGTAGACAGCAAAAACGAAACAATATTGCGCGGGAACACAAAGCGAAATGGTACAGTGCTCAACGTTCTTTCACCCGAGATCACCGCGCGATTTGTTCGAGTTTATCCAGTGAGCTACTTCTCGTTCATTTGCATGAGATTAGAGTTGTATGGCTGCACTTTCGCTTGCGGCGAAGCGTTAGGTGTTGAACCTGGTTTCATAATGACGAAGAGTTCTCCGACTGAAGACCAGGATTGTTTGTGGCACGTCGATGTTCCAAACATCACGAAACTAAATATGGATTTTATCAATTTTAACTTGCCTTGTAGCTATGGTTTTGCAGAGCTCAGAGATGGAAATATGCCTTATTCATCAGCAACAGTCCTAGCCCATTACTGCAGTTTGGATAGTCTCCCCCCTCTTGTTGGCACTAACAGCGGCAAACTTTGGGTGCATTTTAAATCTAATGCATCAGATCCCGAGGTGGGATTCTACTCTGTGTACTTTCCAGGGTGTGGTGGCCATCTCCAGGGAATTCGTGGGGAAATCATTTCACCCAACTTTCCAAAAGAGTATTTTCACAACTCCAAGTGTATCTGGACAGTCACAGTACCTGAGGGCAAATTGGTGCGCTTGAAATTTGTCAACTTCGATGTCGAAGGGGATGTAAATCGTCAGAGGTGCCCACATGATACGCTCACTGTATGGAATAGTTCTGATTCAGATGCCTCTGTGATTGGAAAGTTTTGCAATAGTAATCTCCCCCCTTCTACAATATGCAGTGCTGGAAACACTCTTCGGCTCAAATTCCACAGTGATGATGCACTGGCATACACAGGATTCAACATCACATTCAGTGAACTTGATAGTTTGGTGTCTTGTTTTGAGATGTCTTCCAGTATATCAACATCCACAAGGATTTCATCAGTAGTTGCACATGTTACCCCTACTCCTTCCATAGCAATTCAAACTGTTTTCACACAACAGGAAATGTTTCCAGCAAGCAATCATCTTTTAGAATTTGCGGCAAAAACTTCAGTATTGATACCATCAGGGACATCTGCTTCAGTGGTGACAAATGGGACAATGATTGTTTTCCCAGGAGTTTCTGTTGATGTTGCAGCTCAAAGGAGGAAAAAAGATGATGACAAAGATGATGGATTATGGTCAGTTATCATACTGTCGGTTTTCTCCTGTGTCGTCTTGTGCATGATAATTGCAAGCATGGTACCAAGTATAAAAAAACATTATGACAAACGAAAactggaaaaagaaataaacttgttGTCTGCACCTATGCTTACCAGGAGTATCCCAAAAACAGACAGTAAAGAGACCCTTGAAGGTAGTCAAGGGCCGGTGCGAGAAAGTTCTGCTTGCGAAGATGAAGAGAGTATGCAATCCATTGATGGAGCAGAGAGTGAATCATTGAGTGCGACTCCCTCGGTGGAGTTAATTCCAGAAAAAACTGAAGCTGATCAAATCATTGCTATTCAAGGTAAAGGCAGCTGCCAAGAATATGTGGAAGGGATGGTTGACTATATGGATGATGTAGAGGAAGAAAGCACTGAAACAGATGCTTTTATTGGTagtggtggtgatgatgatgatgatgatgatgatgatgatgatgacaattcACCGGAAATTGGCAGTTTGCAAATGTCCTATGAGGATCTGGGAAGCTCCTTTGCTCaagaaatgcaaacaatgtTAGGACAGCTTGTGAAAGATGATGAGCTGCCAACTTGGAATCATAGTATTTTGACAAGCCAAAGTCAGTCACAGGATAGTAAACAAAAGGAAGAGAGTATTGTCAAAAAGGAATCAGACACAAGCAAGAGCACTCATCATGCTCTTTTGCCTGTCCAAGAAAACAACAAGAGTCGTGGCTGTGACTGCAGAAGTGAAACGGAGAAAAATCATCTAATTGATCCAAGCACTAGTGAGACTAGTGTGTAG

Transcript

BRAKERNUST00000043044

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F1RWC3	Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3
O60462	Neuropilin-2 OS=Homo sapiens OX=9606 GN=NRP2 PE=1 SV=3
O35375	Neuropilin-2 OS=Mus musculus OX=10090 GN=Nrp2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008894 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR050633 all species →	Family	Neuropilin/Multicopper Oxidase/Coagulation Factor	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46806 all species →	F5/8 TYPE C DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000043044.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.