Detailed information of BRAKERNUSP00000043277.1 in Montipora cactus

Genomic Location: BLFO01003932.1:869999...872472
NR annotation: XP_029187305.1, N-alpha-acetyltransferase 38, NatC auxiliary subunit-like isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2BIG9N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Danio rerio OX=7955 GN=naa38 PE=3 SV=1
Q9BRA0N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Homo sapiens OX=9606 GN=NAA38 PE=1 SV=1
Q9D2U5N-alpha-acetyltransferase 38, NatC auxiliary subunit OS=Mus musculus OX=10090 GN=Naa38 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007032 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423
all species →
LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034110
all species →
DomainLSM domain containing 1, Sm domainInterproscan
IPR047575
all species →
DomainSm domainInterproscan
IPR001163
all species →
DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR050914
all species →
FamilySmall nuclear ribonucleoprotein-associated SmB/SmNInterproscan
IPR010920
all species →
Homologous_superfamilyLSM domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10701
all species →
SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND NInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0031417
all species →
Cellular ComponentNatC complexInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000043277.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP