Gene detail

Detailed information of BRAKERNUSP00000043938.1 in Montipora cactus

Genomic Location: BLFO01003976.1:483198...493487
NR annotation: XP_044178051.1, dnaJ homolog subfamily C member 16-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

BRAKERNUST00000043938

ATGAAAACTACTTTGTTTTTAAGGCATCTTTTGCTGTTTGGCTTGATTCTGATTCAATTTCCATCGTGTCTAGTATCGTTGGATGGTGATGAAGACCCTTACAAGATACTGGGTGTTCCTCGATCTGCAAGCAACGACGCCATAAAAAAAGCTTATAAGAAAATGGCCAGAAACTGGCACCCTGACAAGAATGATGATCCGGAAGCACaagaaatgtttattaaaataaatgaagctCATGAGATTTTGTCTGATAAGGAAAAGAAGCAGCACTTTGATTTGTACGGCACTACAACGCAACCAAGAAATGGTCAAAAACAAGGAAGTCCATTTTTTGATCCTCATAGTGGCTTTAGCTTCTTTTTCAATGGAATGCCTTTCCAGAACAGTTGGTCAAGACCTGGACAAATCGACTATAGAACATACTACAAGACCATTCTACCAATGAGCAGTGAAAAGCCATATTTGATAAAATTTATTGCAGACTGGTGTTTCGCCTGTGCACAAATTGAAGAGATATGGGAAGATACAACAAATGGCATGAAAAAGAATGGCATGGGAATCGGCATAGTCAACATAAACAGTAGTCCACGTCTTGCTGACGCTTTGGGCATAAGGCATGTTCCAAGCATCATTGGTGTTATAAATGGATACATTTCATTCTACAGTGGATCGGTTACCAAGCAAAGATTGAAAGATTTTGTAACTGGATTGTTCCCTGGTGGACTGATTCAAATGGTAACAAAACAGAATTTGGATTCTTTCCTGGATACAAGTGGAACAAACAAACCTGGTGTAGTTCTCTTCTCACAAAAACTTTTGCCTTCACTACTCTATCAGCTTGTTGCTTTTAGCAGTCATAAGCAACAGTCATTTggctttgtttcattaaaagaCAGCTCTGCAGAATCCATCAGGAAGAGATTCCATGCGAACTCTGAAGAAACGACAGTTATGATCTTTAAAGACGATGCAGCTGCACCAGATGTTGTAGTCACAGCATCAGAACTGAAAAGTGGAAAACTTCGGGAAGTGGTGGAAAGTCACAAGTATTTGTACCTTCCAAGGCTTTCATCACGAAGCTTGTTTCATGACCTTTGTCCTGAGGAGAGATTTAGATCACAGCGAAGACTGTGTGTTGTCCTTTTCACAAAGCAAGGCCAACACGAGAAAGAAAAGCTTATCCTGAGATTATtagcaaaagacaaaaaataccAAAATGAGCAACGCATTCAATTCCTTTATCTCTATGAAGATGTGCAAAaggaatttattattaatggtTTTAAAGATGGCATGAAGGAGGATACATGTGCTGATAACTCCACTGCACCAAAGgTAGTAATTATTTGgaacaaaggaaagaaagaaataagatATGATTGGCTGCGGACAGGATGGTGTGTGTCAGATGGAGAGCTGTCACTAACAAAAGCACGACTGGTGGTCATGTTAAATGACTTGTTatcaggagaggggaaactaCGCTACACTTCAAGGCTTCCATTCATACATAATGAACATGCTCCAGGGCTGCTGTCATTGTTGTTGACCTGGTGCAATGATGCATTTTACTATGTAAGGTCCTCCATGTATCGGAAAGAGGCTATCTCCTTAGTTTCATTGCTATTTGGATTGggaattattttgttctttaatgCCTTTGTTCCCAGTGCGAGTGAATCGCTGGACAGGGTTCATAAAACATCAAAAAAGAGCCACTCTCCACCCCCGCAAAACAACACTGTTCTGGGTGTTGTTCGTTTGGATCCAAGTAATGAACATTCTTTGGTGTCGGAAGCTCCCCCAGGTCACATGACATTTGCTCTGCTTGTAGACGAAGAGAGTGTACAGGAAGCCGTAAATTCACCTCTGATCCAAGCTTTTTCTGACGTAGTGAACCCATACAAAGGCAACCCGAACCTCACGTTTGCCTGGCTGACAATTTCCGACAATCTTGCGTGGTGTTCTGAGGTGATGAGCGTTGACAAGTTTGGCGAAGTGACTCCGGGCATCGTTCTTGCATTAAACGGCCACAAGAAGTATTTATCAATCTTCAAACCCAGCGACCTCACAAAAAGTGCTTTTTTCAAGCGCCAAGGAGGTGATTTGATGGGATTTGACAACAGCGACAGCGAAACCGAATCGATCAGCGATCCACAGAGAGAATACGAGCTGAAACGTCAGAAGGTGTTGAGTATATCACTACGGAGACAATTTGTAGTTTGGTTGGAGAAGCTTCTCGATGGATTAGTAgataggaaaaaaattgaagaatgGCCAAGATTTACGGACTAA

Transcript

BRAKERNUST00000043938

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2G8	DnaJ homolog subfamily C member 16 OS=Homo sapiens OX=9606 GN=DNAJC16 PE=1 SV=3
Q5ZKZ4	DnaJ homolog subfamily C member 16 OS=Gallus gallus OX=9031 GN=DNAJC16 PE=2 SV=1
Q5RCM7	DnaJ homolog subfamily C member 16 OS=Pongo abelii OX=9601 GN=DNAJC16 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006288 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan
PF00085 all species →	Thioredoxin	Thioredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR018253 all species →	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR052448 all species →	Family	DnaJ Homolog Subfamily C Member 16	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44303 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER 16	Interproscan

Gene Ontology

No Gene Ontology signature was recorded for BRAKERNUSP00000043938.1 in Montipora cactus.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09536	DNAJC16; DnaJ homolog subfamily C member 16	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.