Gene detail

Detailed information of BRAKERNUSP00000044421.1 in Montipora cactus

Genomic Location: :...
NR annotation: CAH3113715.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERNUST00000044421

ATGGCCCGTTCTTCCAGAGGTGGAATATGGAAATTATACCAAGATGGTATTATCAAAGCATCAGAAACAGGTTTTGCCGCAGATGTTAGGATGGAAAATGGTTACTTAATCATCGGAACTTTTAAAGGCAACTTGGCTCTCTTTAACATGTGGGATGAATATATCGacgatttttttctcataaaagacCTCACCTGTTCCCAACATTGGACAGGGAATGTTGTACCTTGGCCGGTGGTTCAGTTTTCGCTTGTTGGAAATGTTACAGTCAAGAACttttcaatttggaaatattcAGggTTCAAATCAGCTTTAATTGGGCATGTCCCTGAACACCAGGAAAGGTTAGCGGGATGGTTATGGTGGTCTACAGGTTGCAAGAGGCGATGGGTTCCATGTTACAGGGCTACTGTTGATGGATGGAAAAGTTTTGTATTCCATAATCAATGCGACAACAAGGGGCCGACAGTGACGATAGCCAGAAAAGATTCTTACTTATTTGGAGGCTTCGCAGACGAGAGCTGGAAAaGTTATTCTCCACCTCAAAGCATTCCGTCAACAAGATCATTCCTGTTCAGTTTAAAGCCTTCTGTGACAAGCGGCAATGCTGAAAAATTTATGCTGCTACCAGGGATGGGAAACCAATCTATTAGAGGTGACACTGATCGAGGACCGTGTTGGGGTATCAACACCGATGAACTTTGCTTTAACTCTCAAAATGTGACAATAAATCCGAGGGGTGTGTTCGACAATAACAGTATCGACTCCCTCGGTACCTTTTTCACTGGAGAGCCTTCATTTCAGGCAGATGAAGTCGAGGTGCTTGTATTAGAAGATTCTCTCTGCGATCCTCCCTGTAGTGAACATGAAGCTTGTGACAACATCACACGGAAATGCGTTTGCGATCCGACGTTTAGAGACGAAGAAATTTGCAGGTTGAGGCAAGAGTTGCAAGCTCTTAGAGACGAACACTGCAATTTGAGATGGAGTTCGAGTCGAACAGATTGTCGTGGACGACTGTTTGCTCGGTATGACGTCACAAGTTTAACTTCAGTCCGCGCATGGCGCTGCTATTATGAAGATGCGCTTAGTGGCGACCGCAGGCGTTTTGACACTTCAAAGAATTCCATTTGCCATCAAGAGGACTGTAACCTGACGCTTGAGGATCCCTCATCTGAAATTTCATGTGCGGTCGCTCCAGAAGATTGTTGCAGACCTTTGGGCATGGAAGGCAATGTCATATCGGATTCACAGATTATTGCTTCGTCTGAACATTATCGTGGTCACGGTTATGGAGCCCGCAACGCCAGACTTAACTTCCAACCTACTTCTAACAGGGATGGTGGTGCTTGGTCATCTAAATACTTAACAATCGAGGAGTGGTTACAAGTGGACTTTCAAAAATCAGTTACTGTAGGCAAGGTCGCCACTCAAGGAAGATCTGATTTTCCTCAGTGGGTAGAAACTTATTCCCTCTCTTACAGTATGAACGGAAGTGTTTTCACAGTGCTCCAACAGAATGGCGCAGATAAGGTTTTTACGGGTAACTCCGACCAAAACACCATCGTCTGGAACGTGCTGAATCCAGCCATCTTCACACGCTTTATTCGTATTCTTCCCAAGAGTTGGCACCACCATATATCTTTGAGAGCAGAGTTTTACAAGTGCAATGCAACTGATTTTTTTGCACAAACGTACAACCTTTTTGAAGTTGATGACCTCTTGTCCGATTCCGAATATTTATGGACGTTCGATGATGTCCACAACATCAAGGACGAACATGGTCAAATATGGGCTCAATCCAATCGTGGCGCCCTTAAACAAACTGCAGGAGTTCGAGGCCGAGCCGTACAAGCATCCGGGGGTGCAGGGCACATCCGAATTGGCGTTGATCAGGCCGATGTATTCACTAAGCCAGTAAATAAAGAAGGCACAATAAGCCTGTGGGTTAAATATCAAAGCAAAGGACCTGGTATTGCACAGACGTTCCTCTCTGTTGGCCGTGAAGACGAAAAGGGAATACATCTTTATCAGGGCAATGGAAGCAGAGAAGAACTCACGCTTCTACTGGGAGCTTCTTTTAGGTCATGTTCGTTTACGTTTGGCGTTCCCCAACGAGTATGGACACATTTGGTATACTCAAAGAGCGGTTGGCCTAATAAGTTCAAAATATACCGCAATGGGTACTTACTCACCGAGGCGAGTGTGGTACAAAATTGTCAGGATCGAAACGTATCGCGaggtgataaaaacatttttcttggTTCAAGTCAGCTTCCTACAGCCAAGTTTGATGACTTTGTGGTTTGGAAAAAGACGCTGACAGATTTACAGGTTGAAAAATTGTTCAAGTTTTACAAAGGTGCTGCTAACCTTCACATCAATGTAAGTTTGGAGATAATTGGAGAGACCTTGTATCCAGAGTTGATGAACAGAGAATCGGCcatgtttcaaaacaaaacatcttgGCTGGAGAGTGAGATCAAACGCCTTCACAAGGAACCTTCAATTTCAAGAATCGACAACTTTTTGTTCTGGAGTTTAGCCGATCTGGCCGTCAACTTCACAGTGAAATTTAAGGGGACTGGATACGATGAAATCGAGCCACTTGAGACAAGCCTCAAGGACCAAAGCATGCTGGGTAGCATCCCGGTTAAACTTGTTGCCATGGAAGCAAATGACGTTTACATCCAACCTCTTCTTGTTACAACCCAAAAGATAACTAATACCACTTTATCCGTCTCCTGGAGCGAGCCTCAAGACCTAACACATGGCATTTATTCCGGGGTTGAGATTTTCTATCGCTTGAATGAGTCAGAGGAAAAACATAACGTCATGGTGGAACAGTGGTCTCCATTATATGAGATTAGGAATCTTCAGCCGTATTCCTGGTACGCAATTAGTGTCAGGCCCCACACCCTCGAGGGCACAGGAAAAGTAAGCGAGGAGATCTTGGCACGAACAAAGGATGGCTTGCCCACATCATTTCCTTTAAACGTTGATGGCTTCCTCGGCGAGTTCGAAGACATCATCGTAACGTGGAGTCCAGTTCCCGTTAATCATCAGCGTGGGGTTATTCAAGGTTATCACATTGTTTATGTGGCTCAACCTTCTGGCATTCAACAGAAAGTGACAGTCACTGCAAATAAAACGCGAGTGGAACTGCAAAACCTGAAAATATACACACTGTACACATATGCGGTAGCTGCCTTCACTGTCGCCGGTCAAGGTCCGTCAAGTCCAGAGGTTGAGGTTCGATCGGCAGAGAGTGTTCCAAGCCAACCACCTCCGATAATATTGGCACACAGCACGAATTTCAACTGTGTCACGGTAACATGGAAAGCTGTCCCAAAGAACTATTCAGGTGGAGTTATCAAGGCTTACGGCGTGAAGATTGAGGGTCGCTCAAACAGACATAGATATCTATATACCTGTAGCAATAGTTTTAACATCGTAATCCAAGGTCTGGAAAAGGCAAAGGTTTACAAATTAAGTATTGCTGGCTATACATCAAAAGGAATGGGAAACGTCAGTGAATACATGACAGTTCAAACTAATATTGGTGCCTGCCGAGCCCTTGGCATGGAGAACTGGAGAATTAGCAACAGTCAGATTACTGCGTCATCAAACCTTCATGATGCAAAAAATGCCCGCTTGAACTACCGCGCAGCTTGGAGTGCAGATTCGGGTGACACCGAACTGTGGCTTCAAATCGATCTTGTGGCGGTGGTGACAATCACAAAGATAGCAACTCAAGGACGATTTGATAAGGATTACTGGGTCACAAATTATTCTTTGAGCTATAGCCGTGATTCGCAGCAGTTTTTTAAAGAGTATAGGCAATCCGCTATTATCAAGTACTTTCAGGGTAACTGGGATAGAAACACAATTGCAGTAAATGTGCTCATTCCAGTCATCAAGGCCCGCTACGTTCGCATTTTGCCAAAGGCTTGGCACAGTTGGGCGTGCATGAGAGTGGAACTCTACTCTTGCAATTATGTCTTGATGGTGGACCCTGTAAATGTCACCAATATCACAGCAAGTTCATCAAGCGTAGGTTTGTCTTGGAAGCCACCAGAGTTGATGGAACCAATCGCCGAATATCGCTTGGAAGTCGTTGATCTTCTAAGAGGAGTGCGGCGTAACCTTACCTTTAATTCTTCCACGACAAATGTAAACTTGGGTTTCTTGAAACCGTTTACGAGTTatgaatttcaagtttttggtTCTACAAGCACCTGGGAGGGAAAAATTACAGATACAATCAGCGTGACTACGCAGGAAGACGCTCCAAGTCAACCTCCAAGAAACTTTACTTTTCAACGCTCGACTTCTTCGGAACTGACGCTTGAATGGACACCAGTGCATCAGTTCTTTATCAATGGAAAGCTTCGTGGATACAAAGTCAAATACAAGAAAACTGAATCTCTAAGCGCCACCTGGACAACCCTTGTTATTAATGTCAATGAAACTCAACGATCTCGTCGAAAAAGGAGTGTAGCGGACGAAGCGATGACCTTTAATTTGGAAGGTCTAAAGGCGTATACGAACTATACTGTCCTAGTATTGGCTTTTACAATTAAAGATGGTGTACCAACGTTGGCAACAAACTTCACCACCGCTCAAGATGCACCGAATCACGCTCCAGTGAACATCACGGCCTACAACACAAGCTCTACGAGAATTAAGGTGACGTGGCAGCCAATCCCCCCAAGTCACGTGAATGGAATCCTCATAGGATACTGCGTGAAATATCGAAGAACTGACAAAGTAAACGAGAacatttccatggtaatggtaaATAGCACCACAATGAGTGTAGAACTGATCGGGTTGAGGAAGTATAAGCTGTATTCGATCGAGGTCTCCGGAAGAACCGCTGTTGGATTCGGAAACTACTCTGATGCTCTGTTTGTTCATACTGACCAAGACGttcccGATGATCCACCAAGTAACATAAGGGCAATCGGAACTGAACCAACAGTGATTAAAGCTTACTGGCTTCCGGTGTGGAAGGAAACCAGGAATGGCGTTTGTCTTGGATACAAGTTGGATTTACTCGATTCTTCTGGTCACAAAATACGCAACTACACTCTCGGTGCTTCTGTGCTCTCTCTTAAGATCACTGGTCTAGAGGTCTGGACCAATTACAGCATCAAAATGGCTGCTTTCACCATGGCAGGAGTGGGGAAATGGAGCGACGCAATACTAGTAGATACAACAGAAGAAACTCCAAACAAACCCCCAGCCAATCTAACAGGATATGCCAAGAATTCAACCTCAATATCTGTAAAATGGGATCCACTTGTCTTACCAAACATCCGAGGAGTTCTTCGTGGCTATGCTGTGTATTATAAAGAAGCGCCAAACTCAGTTCATCCAAGCATGCTAAAAAACATAACGGTTGACATGTCGGTTACATACGCCCTTCTGATCAATTTGCACAAGTATACAGAGTACTTCATCTGGGTAACGGCATTCACAACTCAAAACGGAGGGATGAGTCAATCCATATCTGTAAAGACAATCGAGGACGTTCCCGACCGTCCGCCATCCTTCATCACGCATTCGTCACCAAGCTCCACAACCGTTCTGCTTAACTGGGGTTCAGTCCCTCCAAGGTTCAAGAACGGTATCATAAGAGGCTTTAAAATTGAGTACCAGGAAAAGAAGCCCAATGCAATGGTGGAGGCTAGAGAGCGCATGCTCGTGAACTGGGTGTTCCTTGACAATCTTCAAAAGTTTACAGTGTATACTGTGCGTGTGCGCGCTTTTACTGTTCTAGGATACGGACCAGCGATTAATACAACTATCATCACAAATCAAGATGTTCCCAGCAAACCACCGCAAAGCATCACTGCAGAAAGCCACGTTACCTTGACGACCATTCCCGTCCGCTGGACAGAAATCAATTCACGCCACATCCACGGAGTGTTGCTTGGTTACAAGGTCAGGTACCAGGTCATCGCTGTTGGCCAGGAAAAAATTGAAGatcaaccaatcacagaaaTCAGAGTAAATTCATCTACCTTTTCATTGGTGTTAGGGAATCTTGAGGTGTTTACTTTATATCGCATTGACGTGGTGGGATACACGATCGTGGGGGATGGTCCATCAGCCTGGATTAATGCAGAGACTTGTCGTTGTTATAAACGCTTTACCACAAGCTGGTACGCCTTTCAACCGTACGTCCAGTCGTCAAAAAACGGCACTCCAAGTGGCCTTATTCCACCAATCTTGAGCAAGCTGGTAGTCACATGCTGTAAAACGTGTAAATCACATGGAACATCTTACGTGGACTTAAACTCAAATGGGTTTGACCAGTCAGCGAAGCTGCCCAATTCGCGCAGGCTCAAGTCAAGCATCGCGGATCCCACCGACTTTTTCTTCCCTGTTTATGGTTTTAAAGACCAGTCACACTTCGCGGAAGAGTTTGGTTATCATGGTCTGGTGGAGTCACCTGGAATGGCGTACATTGTGAATCCAAACTCGCATGATGACATGCCCAATGCAGTGTTGATGAAGGTCGTATCATGTTGGCCAGCGGTGGTGCTTGTATTCATGATAACCTATGTAGCAGGCCTAATCATTTGGTCAGTGGAATCTCAAAACAATTCACGGGACTTTCCTGAGTCGTTCATCCTGGGAGCACCAGAAGGATTTTATTGGGcttttgtttccatgacaaCTGTTGGATATGGCGACCGCACCCCGATCTCATTTGTTGGAAGACTTCTTGCCGTTGTTGTCATTCTATATGGATTGGTGATCTTTGGACTTGTGAATAGCTTCATGGCGACATCCCTTACAAGCGTCACACTGGACACAGACTTCAAAATTTACGGTGCAAAGgtCGCAGCGATCCAGGATTCACCTGAATACAGAATGGGAATACGGAAAAATGCAAGGATGGATACAGATCAGGTGTACCACACTTTTGAAGATATCTACACAGCTCTACGGAAACGGAGGGTCATCGGTGCTTTAATTGACACGTACAGTGCAGGAAGCAGCAAAGAGAGATTTGAACAGGAACATCTTCGATTAAATAAAATTCTGGATTATTCATCCACGTATGGAGTGGTAATGGGTAAAGAGGCCAAGAAGCTGAGAAAATGTTTCAAGGCTTACACTCAACATGGCTTTGCCAACGAAATCGCACGTCTTATTCAGGAGAACACAAAACAATTAAAGGAGCCCCCCGACTCACTCCCAGTTGAGAAGTCAACAGGTATCTTTGATAGTCGGAGCACTTTATTTCAAAGAACCTTTCTCACAGCCACTACGGTATTGGCAGCTTTCACGTTGGTTGGTATCATCTATGAAGTCAAACGACGCTTGAGAGCGCGATCCCTGACTTATCCATGGCAACTCGGTAAGTTCTAA

Transcript

BRAKERNUST00000044421

Protein

BRAKERNUSP00000044421.1

MARSSRGGIWKLYQDGIIKASETGFAADVRMENGYLIIGTFKGNLALFNMWDEYIDDFFLIKDLTCSQHWTGNVVPWPVVQFSLVGNVTVKNFSIWKYSGFKSALIGHVPEHQERLAGWLWWSTGCKRRWVPCYRATVDGWKSFVFHNQCDNKGPTVTIARKDSYLFGGFADESWKSYSPPQSIPSTRSFLFSLKPSVTSGNAEKFMLLPGMGNQSIRGDTDRGPCWGINTDELCFNSQNVTINPRGVFDNNSIDSLGTFFTGEPSFQADEVEVLVLEDSLCDPPCSEHEACDNITRKCVCDPTFRDEEICRLRQELQALRDEHCNLRWSSSRTDCRGRLFARYDVTSLTSVRAWRCYYEDALSGDRRRFDTSKNSICHQEDCNLTLEDPSSEISCAVAPEDCCRPLGMEGNVISDSQIIASSEHYRGHGYGARNARLNFQPTSNRDGGAWSSKYLTIEEWLQVDFQKSVTVGKVATQGRSDFPQWVETYSLSYSMNGSVFTVLQQNGADKVFTGNSDQNTIVWNVLNPAIFTRFIRILPKSWHHHISLRAEFYKCNATDFFAQTYNLFEVDDLLSDSEYLWTFDDVHNIKDEHGQIWAQSNRGALKQTAGVRGRAVQASGGAGHIRIGVDQADVFTKPVNKEGTISLWVKYQSKGPGIAQTFLSVGREDEKGIHLYQGNGSREELTLLLGASFRSCSFTFGVPQRVWTHLVYSKSGWPNKFKIYRNGYLLTEASVVQNCQDRNVSRGDKNIFLGSSQLPTAKFDDFVVWKKTLTDLQVEKLFKFYKGAANLHINVSLEIIGETLYPELMNRESAMFQNKTSWLESEIKRLHKEPSISRIDNFLFWSLADLAVNFTVKFKGTGYDEIEPLETSLKDQSMLGSIPVKLVAMEANDVYIQPLLVTTQKITNTTLSVSWSEPQDLTHGIYSGVEIFYRLNESEEKHNVMVEQWSPLYEIRNLQPYSWYAISVRPHTLEGTGKVSEEILARTKDGLPTSFPLNVDGFLGEFEDIIVTWSPVPVNHQRGVIQGYHIVYVAQPSGIQQKVTVTANKTRVELQNLKIYTLYTYAVAAFTVAGQGPSSPEVEVRSAESVPSQPPPIILAHSTNFNCVTVTWKAVPKNYSGGVIKAYGVKIEGRSNRHRYLYTCSNSFNIVIQGLEKAKVYKLSIAGYTSKGMGNVSEYMTVQTNIGACRALGMENWRISNSQITASSNLHDAKNARLNYRAAWSADSGDTELWLQIDLVAVVTITKIATQGRFDKDYWVTNYSLSYSRDSQQFFKEYRQSAIIKYFQGNWDRNTIAVNVLIPVIKARYVRILPKAWHSWACMRVELYSCNYVLMVDPVNVTNITASSSSVGLSWKPPELMEPIAEYRLEVVDLLRGVRRNLTFNSSTTNVNLGFLKPFTSYEFQVFGSTSTWEGKITDTISVTTQEDAPSQPPRNFTFQRSTSSELTLEWTPVHQFFINGKLRGYKVKYKKTESLSATWTTLVINVNETQRSRRKRSVADEAMTFNLEGLKAYTNYTVLVLAFTIKDGVPTLATNFTTAQDAPNHAPVNITAYNTSSTRIKVTWQPIPPSHVNGILIGYCVKYRRTDKVNENISMVMVNSTTMSVELIGLRKYKLYSIEVSGRTAVGFGNYSDALFVHTDQDVPDDPPSNIRAIGTEPTVIKAYWLPVWKETRNGVCLGYKLDLLDSSGHKIRNYTLGASVLSLKITGLEVWTNYSIKMAAFTMAGVGKWSDAILVDTTEETPNKPPANLTGYAKNSTSISVKWDPLVLPNIRGVLRGYAVYYKEAPNSVHPSMLKNITVDMSVTYALLINLHKYTEYFIWVTAFTTQNGGMSQSISVKTIEDVPDRPPSFITHSSPSSTTVLLNWGSVPPRFKNGIIRGFKIEYQEKKPNAMVEARERMLVNWVFLDNLQKFTVYTVRVRAFTVLGYGPAINTTIITNQDVPSKPPQSITAESHVTLTTIPVRWTEINSRHIHGVLLGYKVRYQVIAVGQEKIEDQPITEIRVNSSTFSLVLGNLEVFTLYRIDVVGYTIVGDGPSAWINAETCRCYKRFTTSWYAFQPYVQSSKNGTPSGLIPPILSKLVVTCCKTCKSHGTSYVDLNSNGFDQSAKLPNSRRLKSSIADPTDFFFPVYGFKDQSHFAEEFGYHGLVESPGMAYIVNPNSHDDMPNAVLMKVVSCWPAVVLVFMITYVAGLIIWSVESQNNSRDFPESFILGAPEGFYWAFVSMTTVGYGDRTPISFVGRLLAVVVILYGLVIFGLVNSFMATSLTSVTLDTDFKIYGAKVAAIQDSPEYRMGIRKNARMDTDQVYHTFEDIYTALRKRRVIGALIDTYSAGSSKERFEQEHLRLNKILDYSSTYGVVMGKEAKKLRKCFKAYTQHGFANEIARLIQENTKQLKEPPDSLPVEKSTGIFDSRSTLFQRTFLTATTVLAAFTLVGIIYEVKRRLRARSLTYPWQLGKF

Uniprot

Uniprot term	Description
P0C5E4	Phosphatidylinositol phosphatase PTPRQ OS=Mus musculus OX=10090 GN=Ptprq PE=1 SV=1
Q9UMZ3	Phosphatidylinositol phosphatase PTPRQ OS=Homo sapiens OX=9606 GN=PTPRQ PE=1 SV=2
Q8TD84	Cell adhesion molecule DSCAML1 OS=Homo sapiens OX=9606 GN=DSCAML1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885	Ion_trans_2	Ion channel	Family	Interproscan
PF07534	TLD	TLD	Domain	Interproscan
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR006571	Domain	TLDc domain	Interproscan
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan
IPR001759	Family	Pentraxin-related	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16353	SDK; protein sidekick	-	Cell adhesion molecules	ko04515	deepkoala