Gene detail

Detailed information of BRAKERNUSP00000044662.1 in Montipora cactus

Genomic Location: :...
NR annotation: XP_029213107.2, plasma membrane calcium-transporting ATPase 2-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERNUST00000044662

ATGTCAGGCCCGCAGTGTACTTCTAAACAGGTTGGGGACAGGACAGAATGTGCTCTGCTCCAGTTCGCCCTTGACTTGGACGAGTATTATCCGTTTATAAGAGAAAATCACCCTGAGGAGTTGTTTGTTAAGGTATTTAACTTTTCATCGCAACGTAAATCAATGACTACAGTGATCCCTGATGGCCAAGGATTCAAGATCTACTCCAAAGGAGCACCAGATATTCTGCAACGCTGTACGTCGATTGTGCGGCAGGATGGTAGCGTTGGCAGATTTATTCCTGAAGCTAAATTGAGAATTGACGAAGTCATCAAGCACATGCAGGAGAAAAGTCATTTGAAAGTGATGTGTCTCGCTTACAGACATTACTATCAATTTGGGGAAACAAGTGCACAACAATGGGAAAACGAAGAAGATGTAGCGTCACAATTAACTCTGCTTGGACTTGTGGGTATCGAGACTGTGGACGAATCTTCTGAAAGCAGAAAGCGAGTAGTGGAGGGAACAATTGTTCAACAGCCGTTTTGGAGTTTCCAGGGCTTAAAAAGATACAAGAAAGCAAATCTAAGGGAACAAGGTCTTGTTGATGACCTTTGCAGAGGAATCACTGTCAATACAAGCTATTCTTCAAATATTAAGAGTGAGGACGCGGATAATCTCCCAAGACATGTTGGTGACAGCATTGATTGTGCTCTACTACAGTTTATTCTGGAGATGGGTGAAACTTACCAAATATGGAGAGACGAATATCCTGAGGACACACTGGTATACAGGAGTGTGAGCCCAAAAGGAGTCTCACCCACTGAGGAGTTTGCTGTTGCAGTGATTCACGACAAATATGCTGGAACTGGATGCAAGTTGTACTGCAGAGGATCACCAAGTTATTTACTACCTCGCTGTACAAAAATGGCTCTCACCTCGTTCGGCACTAAAAATTACGACGAGGACGATAGAGACAACACGAGGAGGAAGATTTTACACTTGGAGAAAAGAAAACCTTCAATTGAAATAGTTTGCTTGGCCTCTAAATATTTTTCATCGCCTCCGGACGACAACGGGTGGGAGGATGAAAGAATATTGTCAGATCTAATATTCACTGGTTTTGTTGGCATCGAAGAAACGATCCGAGAACAGGTTCCGGATGCAATTTCAGATTTGCGTGGCGCAGGAATCAAAGTTTGTATGGTAACCGCTGACAACTTGAGTTCAGCAGCTTCATTTGGATCCAAAAGCGGGCTGTTGGCCCCAACAGAAGATTGGAACCTtaaagagttttctttttttggatgCGACAGCAGAAGGTTTAAGAACGTCGATCAAAACACATTTGATCAATGGTGGCCTAATGAGATGCGTATCTTAGCAACAGCTGGTCCTGGGGAGAGATTGAAATTCATTAATCACATCAAATACACTCGGTCCACTCCCAACGGAGAGGTTGTTGCTGTGACTGCATCTGGCGTGAATGATGACAAAGTCCTGAAGACCGCTGACGTGGGTCTAACCATGGGAGTGACCGGTACAGATGTGGCAAAAGAATCAGCTGATATTGTCTTACAGGATGACAATTTCTCCAGCATCGTTGAAGCTGTTAAATGGGGAAGAAACTTGTACGAGAGCATCCTTAAATATCTGCAGTTCCAGTTCACTGTCACCTGGGTAGCTATAATCGTCGTTGTTGTTGGAGCGTGTGTCACAACGCGGAGTCCATTGTCAGCAACTCAATTGCTCTGGGTGAACCTTATCATGGACCCTTTAGCTTCTCTTGCATTGACACGTGATCCACCATCACATGACGTCCTTATACATAAGCCTTACGGTCAGCACAAGCCACTGGTATCCCGGATGGTGATTAGGAATGTGATCTTTCACTCCATTTATCAACTGGCTGTCATGTTTGTgctgatgttttttttctcgGATTTTCTTGACATGAGAAATGGATATGACGAGTCCAGTGTATGTCGGCCAACACAGCATGGTACCATGGTTTTCACTACATTTGTCTTTATGACGCTTTTTAATGAGATCAACTGTAGGAGATTGCAGGACAGGAATGTGTTTAAAGGATTACTGCATGGAAAACTTAAGGATAGAAACTTCGTGTTTATCGTCATATGGATTCTTACATTTGGTATTCAGCTTGTCATCGTACAAATCTTCACAAACGCATTTCGTGTCGTCGATATGGAGTGGGATCAGTGGATGTGGTGTCTTTTTTTCGGGTTTTCTGAGTTGATCTGGGCCCAGCTTGTCTTCACTATTCCAAAATCAATCATTCCGCGTAAGATAAGATGCTGCTCATCTGGAATCTCGGAAAACAAGGAAGGTTGCTGGAAAAAATTCTCGCGTATCCGGGGTATTTCTAAAGTCCGCAAACAGaacCAAACCATGTACGTATATGGTCATCAGAATGGAAGATCCTTTGAGAACGTAGTTTCTCCCGGAGGTTCGAGCGAATTTCGGATGGATGTTCGTGAAACAATACATTGA

Transcript

BRAKERNUST00000044662

Protein

Uniprot

Uniprot term	Description
Q16720	Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens OX=9606 GN=ATP2B3 PE=1 SV=3
Q64568	Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2
G5E829	Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13246	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan
PF00689	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR006068	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan
IPR001757	Family	P-type ATPase	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24093	CATION TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005388	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051480	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan