Gene detail

Detailed information of BRAKERNUSP00000045127.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029206848.2, hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X6 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P97519	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1
Q29448	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus OX=9913 GN=HMGCL PE=2 SV=2
P38060	Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Hmgcl PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003337 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00682 all species →	HMGL-like	HMGL-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000891 all species →	Domain	Pyruvate carboxyltransferase	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR043594 all species →	Family	HMG-CoA lyase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42738 all species →	HYDROXYMETHYLGLUTARYL-COA LYASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004419 all species →	Molecular Function	hydroxymethylglutaryl-CoA lyase activity	Interproscan
GO:0006552 all species →	Biological Process	L-leucine catabolic process	Interproscan
GO:0016833 all species →	Molecular Function	oxo-acid-lyase activity	Interproscan
GO:0046951 all species →	Biological Process	ketone body biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01640	HMGCL, hmgL; hydroxymethylglutaryl-CoA lyase	EC:4.1.3.4	Peroxisome	ko04146	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.