Detailed information of BRAKERNUSP00000045451.1 in Montipora cactus

Genomic Location: BLFO01004075.1:226...20422
NR annotation: XP_029183209.2, cysteine--tRNA ligase, cytoplasmic-like isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M7N8Cysteine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=cars1 PE=2 SV=1
Q5F408Cysteine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 GN=CARS1 PE=2 SV=1
Q4R550Cysteine--tRNA ligase, cytoplasmic OS=Macaca fascicularis OX=9541 GN=CARS1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002378 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01406
all species →		tRNA-synt_1etRNA synthetases class I (C) catalytic domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024909
all species →		FamilyCysteinyl-tRNA synthetase/mycothiol ligaseInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR032678
all species →		DomaintRNA synthetases class I, catalytic domainInterproscan
IPR015803
all species →		FamilyCysteine-tRNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10890
all species →		CYSTEINYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004817
all species →		Molecular Functioncysteine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006423
all species →		Biological Processcysteinyl-tRNA aminoacylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01883CARS, cysS; cysteinyl-tRNA synthetaseEC:6.1.1.16
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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