Gene detail

Detailed information of BRAKERNUSP00000045831.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029204006.2, diphthine--ammonia ligase-like isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000045831

ATGAGGGTTGTTGCTCTAATTAGCGGTGGTAAGGACAGTTGTTACAACATGATGCAATGTGTTCAACATGGTCACGTCATTGTAGCACTGGCAAATCTCAAGCCATGCGATGAAGGTACAGATGAACTTGATAGCTACATGTACCAGACAGTGGGACATCATGCCATTGACCTGTATGCGCAAGCAATGGACTTGCCATTATTCCATGGAACAATTCAGGGTTCATCCCTTTCTCTTGGCAAGGTGTATCAAGAGTCCCAAGAAGATGAAGTTGAAGACTTATTCAGGCTGCTTAAGAAAATAAAGGAGGATATTTCATTTGATGCAGTTTCAGTGGGAGCAATTCTATCAGACTACCAGAGAGTCAGAGTGGAACATGTGTGCTCCCGTTTAGGACTATCTTCCTTAGCTTACCTCTGGAGACGAGACCAACAGGAGCTTCTCAGTGAAATGATCTCTTCTGGAATTAAAGCCGTGTTGGTGAAAGTTGCTGCAATGGATTTAAGTCCACATCGTCATCTTGGCTTGCCAATATCAGAGGTTTATTCCCTGATGTGTATTCTGAAAGAGAGATATGGCTCAAATATTTGTGGAGAGGGTGGAGAATATGAGACATTCACTTTGGATTGTCCGTTGTTCAAGAAAAAGATAGTGATagATGAAAGTGAAATTGTTATTCACTCTGATGACGCATTTGCTCCTGTTGGTTTTCTTCACTTCAAGAAAATGCATTTGCAAGATAAAGGAGAGGTCTTGTTACAGTCTTGTGAAAATCGTAAATGTTTGGAAGCCTTGGAACAGTTGCAAATACAGTCAGATAATATGAATGGTACAGGGGAAAATACAGACTTTGATGATGTGAAGATTATATTACCTCCAAGAtctcaaaatcactgtaaagGGGTCATTCACAGCAGAAGTGGTGATTATATTTGGGTTTCTGGAATTTATGGTCACTGTGCTGTTAAAGGGAAAGAATTGGTTATTGAAGATGTAACCAGGAACGCCTTGCACGAGTTGACAGaTACATTGACTGGTTTAAATGCAAGCTTGAGTGATGCAATGATGGTTCATCTCTTTGTTAAAGACATGGATGACTTTGCTAAGGTCAACTCAATTTACAAAACCTTTTTGAAAGTTAATCCTCCTGCAAGagCCTGTATTCAGCTAAATCTTCCTAACAACGTTGCAGTGCAGGTTGATTGTCTTGTTTACAGCCCTCAAACTGCTGGAACAAGGAGAGATGCTATGCATGTTCAAAGCATTTCTGATTGGGCTCCAGCTAATATTGGTCCTTACAGCCAAGCAACAAAGACTGGAGACACTTTGTTTGTCTCGGGATCAATTGCTTTATGGCCACCAACGATGACCATGGTTTCTGGCGGCATATCACGAGAAGCACCTCTAGCTTTACGGCATGTGGGAAGAGTCATATCAGCTATGGCTCCTGACGAATCACTGCTTAGTGTTGTACATGGATATTGTTTCCTTACTTCGCCATCATTTGTGCCTGTTGCAAAGAAGGCATGGTCTCAGGCTACAACATCAACGGGTTTGGGAGGCAGTGAACAAGAGCTGCAGTCACCAGTGGGGGTTATGTCATATATCATTGTACCCTCTTTACCAAAGGGAGCTCTGGTGGAATGGCATGTTGTCGCACAAGAGAATCGCATCCAATGTCATGGTGATTCTTCATCATTGTCCAGAGACaaatttgaatttgctgtgCAAAGCATTTACTTAGAAGGAACTGACAAAAACACCATTGCTGTTAACTTTGCAGTAGAATCCAATTCAACTGAATGTGACCTGGAGGAAATTGTTCAGACGTTTATAAGTGAATTGCAATGTAGCACTTCTCAGCATGGCTTGGGTGTCACTAATCTAATATACACAAGGATATTTTATGTCAAGGAGCTAATGAACCATTGGGATGCACAGGACTGTATACAGAAGGTCTTAGAGAGAGTCCTTCCTCTTGCACCTGCGTTTTCTCTTATACCTGTGGATGGACTTGAAAGGAAGAATACCATTATGCTATTCTGTTGTTTTCTACAGAAATCTAGTCCTAAATCAGAAGAAGGGATGTTTGAATGA

Transcript

BRAKERNUST00000045831

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2RV01	Diphthine--ammonia ligase OS=Danio rerio OX=7955 GN=dph6 PE=2 SV=1
Q2HJF5	Diphthine--ammonia ligase OS=Bos taurus OX=9913 GN=DPH6 PE=2 SV=1
Q7L8W6	Diphthine--ammonia ligase OS=Homo sapiens OX=9606 GN=DPH6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003436 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01042 all species →	Ribonuc_L-PSP	Endoribonuclease L-PSP	Domain	Interproscan
PF01902 all species →	Diphthami_syn_2	Diphthamide synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030662 all species →	Family	Diphthine--ammonia ligase/Uncharacterised protein MJ0570	Interproscan
IPR035959 all species →	Homologous_superfamily	RutC-like superfamily	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR002761 all species →	Domain	Diphthamide synthase domain	Interproscan
IPR006175 all species →	Family	YjgF/YER057c/UK114 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12196 all species →	DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0017178 all species →	Molecular Function	diphthine-ammonia ligase activity	Interproscan
GO:0017183 all species →	Biological Process	protein histidyl modification to diphthamide	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06927	DPH6; diphthine-ammonia ligase	EC:6.3.1.14	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.