Gene detail

Detailed information of BRAKERNUSP00000045858.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029190564.2, uncharacterized protein LOC114957329 isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000045858

ATGGCGAATGCTTCAAAAGGGTCCATAGATTTGGCCTCTCTTTTGAGGACAAATAAAGTGGAGGCACTTCTGGCTACAGTGCATCGTGCTCCTGGAAAATGTCTGGTCTGGACACGGTTTCGTGAGGACAATTCTTCGTGGATTATCAATGTGTCAGATGGAATTGACCTGTGGCACTTGTGCTTGGACCAGGAGCAACTGGATTCACATAGAGAACTGGTGGAAATTGATAAATATGAAACTTACTTTGCAAGATTTAAgtcagattttgaaagtggtGCCATCACATTAACAAGTTTGCCAAACAAAGTGACTCTAACTGTTGGCACAGGGTTTCCATCTTTAAGTTATGACTTGTATGAAGCAAAGGCTAGCgagaagaaaacagaactgcAGACAATCCTCTTCAGATTAGCTGATGAAGTCTCTGAGCTCACTGATCAGTTAAAagAGTCATCAGATTCTTTAGAGAAATTGAAGAATCAAAAGCATGGAGTTGCAACGGGATCAACAATATTTGATATTCCACCAAAGAAGGCAAACCAAACTCTTCCTGTTAAACGCAAGCAAGGCAACAGCCTCATCAATCCTGGAAGCAGAAAAGAATCTGCTGTAGGTGTCAGAAATGGTAACACCACAGAGAACAGTGTGCATGTCTCAGTGCTAGGAAGTGACCAAGTGCTGGATATCTTCAAATGCGAAAACCCAACTTGTGAGCACCTGTGTACAAAGACCAATAAGAGGTACCACTGTCCACTGTGCAACAATAAGCCACAGAAGCCGGGCCGCATGAGGAGacactttgaaaaaatgcattcTGGGAAGCAGATTGTACAGCATGGAGGTTACCAAATGCTCCGGTGCAAGCTGAAATGCACCAAAACAAATGGTCGCATAACAGACAATTCTCATTATCACTGCTGCCTTTGTGGACGAGTGCTTGTGAGAAAGGTTCATCTTTACTGTCATCTGCAAGCCCATGCTGTTGGCAGCATACATGAAATTGATGAAATGTTAGATGCAAAAGAAGATTCAGAAGAAGGACCTTTGGAAGATACAGAAATGGATGATGAGAATGAGGATGACACTACCTTGGATACGTCACAGCTCACAAGATTACAAGGCCCAGAGCAAGATAATGTTGTAGCTTTATCATCTGGAACACAGGTTGTATTTGTCCAGTCTCTTCAGGACAGTGAAACACTAACAGTTTTACCACTTGATGAACAATCAAACACTCTAGCATTGACACAACAAGCTGCAGGTCATGCTGGTTGCTCAAACAGTGTTATTAACTCTTCTAACAATCTGAGTGCAGGTCTTCAAGTGCTTTCTCCAGGTTCATCCAGTCTTGATTCAGTTCAACGTCAATTGCCACAAGGGCTGACAGTCAAACAAGTCGAAGCTATGTTGAATCAAGgtGGAGAAAATACTGAACATGTTCTGGTGGCAACAGAACACTCTGAGAGTAATCTTCCAAATCTTAGAGAAGACGAGGGAGGCATACAGACTTACACCACTGAGGGATCACGAGATATTGACATGGAGGCTGATCGTGGTATGCCAGGTCACTGCATGTCAAAACAGGTGCAGGATGAAGCTATGGAGTTTGAGCCATGCTTACAAGAAGCGGATCTTCATCTGCCTGCAGCTTCCAGTAATAACATCACTGGCAGTAATATGGCAAATGTGCCAAGCTTAGGGCAAAGTAACATTCAACTGGGACAAGTTGAACAAGAAATTTCAAGCCAAGCTGCATCCCAGTTGATCACATCAACCCCTGATAATACCATTCAAACATCAGAGTTAAGGCATTCCATGGTGAGTCCGATCAGCAAACCTCTGTTTGATGAAGAGGCTACTAGCCAACACACTCAGCCACCAAAGGCAAAGCCTGTGCGACAAGATTCACTGGTGTTAGTTGATGCAGCTTCATGTCCAAAGGAAGATGATCAGGTTTTCAAGGTTCTTCTCAACAACTTGTCTCCTGCTTCAAGTTGCGTCAGTCATCCATCAGTTCTAAATGAGAAGGATAATTTGGATATTCGTAGATGCAGAAACACCTTTTGTGATTGCAGATTATACCACTGTCCTCTGTGCACGTGTCTGCCAAACAAGCCGGGCAGGATAAGGGAACACTTTAAAAAGATTCATGCCCAAGATCTTGTCATCAGATATCAAGGTTTCCAGATGTTGCGTTGCAAGCTTGGTTGCTCTCGCCCAACTGGAACCAAAGTTTTAAACTCTCACTACCACTGTTGTATCTGCGGGACAATCTGCATCCGCAAGTCTGGTGTCTATGAGCACATGCGCATTAACCATTCTTCTGAGCCTTTAAAGAAATACAACCTGCCGAGTTTGTCACAGGACATTCAAGAGAAGCAGGTCAAGCATGAAGCAGGACCAAAACCTTTTGTGGTGCAAGTTCCCACAATTCCTGCAGAAACATCGGGGATTGGGAACCAACCCCAGGTCCCACCCAACCAAGGGACGGTGCCAGTCAGCACTACGCCACAGACCGTTACAGTTCAGTTGCCTCAACAAGGAGGTGGTGAGGGTCAAGGTCAGCAACAACTTGTCATTCTTATGCCACAGCAGATTAATCAAGCACAAGTCCAGTCTCCGGTTCCAGCCCAACAGCCTATAGTTATAGTCATGCCACAGACAGGAGGAGCCCAAGTGGCACAGCCGATTGTTGTACCTGTCCCTCAGATCTCAAGCACCTAA

Transcript

BRAKERNUST00000045858

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004671 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15384 all species →	PAXX	PAXX, PAralog of XRCC4 and XLF, also called C9orf142	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR027873 all species →	Family	Protein PAXX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28586 all species →	PROTEIN PAXX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006303 all species →	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0035861 all species →	Cellular Component	site of double-strand break	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan
GO:0070419 all species →	Cellular Component	nonhomologous end joining complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24645	PRDM13; PR domain zinc finger protein 13	EC:2.1.1.-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.