Gene detail

Detailed information of BRAKERNUSP00000045858.1 in Montipora cactus

Genomic Location: :...
NR annotation: XP_029190564.2, uncharacterized protein LOC114957329 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERNUST00000045858

ATGGCGAATGCTTCAAAAGGGTCCATAGATTTGGCCTCTCTTTTGAGGACAAATAAAGTGGAGGCACTTCTGGCTACAGTGCATCGTGCTCCTGGAAAATGTCTGGTCTGGACACGGTTTCGTGAGGACAATTCTTCGTGGATTATCAATGTGTCAGATGGAATTGACCTGTGGCACTTGTGCTTGGACCAGGAGCAACTGGATTCACATAGAGAACTGGTGGAAATTGATAAATATGAAACTTACTTTGCAAGATTTAAgtcagattttgaaagtggtGCCATCACATTAACAAGTTTGCCAAACAAAGTGACTCTAACTGTTGGCACAGGGTTTCCATCTTTAAGTTATGACTTGTATGAAGCAAAGGCTAGCgagaagaaaacagaactgcAGACAATCCTCTTCAGATTAGCTGATGAAGTCTCTGAGCTCACTGATCAGTTAAAagAGTCATCAGATTCTTTAGAGAAATTGAAGAATCAAAAGCATGGAGTTGCAACGGGATCAACAATATTTGATATTCCACCAAAGAAGGCAAACCAAACTCTTCCTGTTAAACGCAAGCAAGGCAACAGCCTCATCAATCCTGGAAGCAGAAAAGAATCTGCTGTAGGTGTCAGAAATGGTAACACCACAGAGAACAGTGTGCATGTCTCAGTGCTAGGAAGTGACCAAGTGCTGGATATCTTCAAATGCGAAAACCCAACTTGTGAGCACCTGTGTACAAAGACCAATAAGAGGTACCACTGTCCACTGTGCAACAATAAGCCACAGAAGCCGGGCCGCATGAGGAGacactttgaaaaaatgcattcTGGGAAGCAGATTGTACAGCATGGAGGTTACCAAATGCTCCGGTGCAAGCTGAAATGCACCAAAACAAATGGTCGCATAACAGACAATTCTCATTATCACTGCTGCCTTTGTGGACGAGTGCTTGTGAGAAAGGTTCATCTTTACTGTCATCTGCAAGCCCATGCTGTTGGCAGCATACATGAAATTGATGAAATGTTAGATGCAAAAGAAGATTCAGAAGAAGGACCTTTGGAAGATACAGAAATGGATGATGAGAATGAGGATGACACTACCTTGGATACGTCACAGCTCACAAGATTACAAGGCCCAGAGCAAGATAATGTTGTAGCTTTATCATCTGGAACACAGGTTGTATTTGTCCAGTCTCTTCAGGACAGTGAAACACTAACAGTTTTACCACTTGATGAACAATCAAACACTCTAGCATTGACACAACAAGCTGCAGGTCATGCTGGTTGCTCAAACAGTGTTATTAACTCTTCTAACAATCTGAGTGCAGGTCTTCAAGTGCTTTCTCCAGGTTCATCCAGTCTTGATTCAGTTCAACGTCAATTGCCACAAGGGCTGACAGTCAAACAAGTCGAAGCTATGTTGAATCAAGgtGGAGAAAATACTGAACATGTTCTGGTGGCAACAGAACACTCTGAGAGTAATCTTCCAAATCTTAGAGAAGACGAGGGAGGCATACAGACTTACACCACTGAGGGATCACGAGATATTGACATGGAGGCTGATCGTGGTATGCCAGGTCACTGCATGTCAAAACAGGTGCAGGATGAAGCTATGGAGTTTGAGCCATGCTTACAAGAAGCGGATCTTCATCTGCCTGCAGCTTCCAGTAATAACATCACTGGCAGTAATATGGCAAATGTGCCAAGCTTAGGGCAAAGTAACATTCAACTGGGACAAGTTGAACAAGAAATTTCAAGCCAAGCTGCATCCCAGTTGATCACATCAACCCCTGATAATACCATTCAAACATCAGAGTTAAGGCATTCCATGGTGAGTCCGATCAGCAAACCTCTGTTTGATGAAGAGGCTACTAGCCAACACACTCAGCCACCAAAGGCAAAGCCTGTGCGACAAGATTCACTGGTGTTAGTTGATGCAGCTTCATGTCCAAAGGAAGATGATCAGGTTTTCAAGGTTCTTCTCAACAACTTGTCTCCTGCTTCAAGTTGCGTCAGTCATCCATCAGTTCTAAATGAGAAGGATAATTTGGATATTCGTAGATGCAGAAACACCTTTTGTGATTGCAGATTATACCACTGTCCTCTGTGCACGTGTCTGCCAAACAAGCCGGGCAGGATAAGGGAACACTTTAAAAAGATTCATGCCCAAGATCTTGTCATCAGATATCAAGGTTTCCAGATGTTGCGTTGCAAGCTTGGTTGCTCTCGCCCAACTGGAACCAAAGTTTTAAACTCTCACTACCACTGTTGTATCTGCGGGACAATCTGCATCCGCAAGTCTGGTGTCTATGAGCACATGCGCATTAACCATTCTTCTGAGCCTTTAAAGAAATACAACCTGCCGAGTTTGTCACAGGACATTCAAGAGAAGCAGGTCAAGCATGAAGCAGGACCAAAACCTTTTGTGGTGCAAGTTCCCACAATTCCTGCAGAAACATCGGGGATTGGGAACCAACCCCAGGTCCCACCCAACCAAGGGACGGTGCCAGTCAGCACTACGCCACAGACCGTTACAGTTCAGTTGCCTCAACAAGGAGGTGGTGAGGGTCAAGGTCAGCAACAACTTGTCATTCTTATGCCACAGCAGATTAATCAAGCACAAGTCCAGTCTCCGGTTCCAGCCCAACAGCCTATAGTTATAGTCATGCCACAGACAGGAGGAGCCCAAGTGGCACAGCCGATTGTTGTACCTGTCCCTCAGATCTCAAGCACCTAA

Transcript

BRAKERNUST00000045858

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15384	PAXX	PAXX, PAralog of XRCC4 and XLF, also called C9orf142	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR027873	Family	Protein PAXX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28586	PROTEIN PAXX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan
GO:0070419	Cellular Component	nonhomologous end joining complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24645	PRDM13; PR domain zinc finger protein 13	EC:2.1.1.-	Transcription factors	ko03000	deepkoala