Gene detail

Detailed information of BRAKERNUSP00000045916.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_015768438.1, PREDICTED: uncharacterized protein LOC107347082 [Acropora digitifera]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000045916

ATGGACGGTGTTATGAGAGTTGGAGGTCGCATTAGAGAAGCCCCCATTTTGTTTGATGCTAAGTTTCCATCGATTATTCCACCTAAGAATCATGTAGCCCAGCTGCTGATTGCAATCTTCCATCAGAAGCTTGCACATGCTGGTCAAAACCACATACTTGCACGCGGAAGGGAGCAGTTTTGGATACCTAGTGGACGGTCTGCTGTACGCAAGATACTGGCTGACCATTTTTGGAAACGGTACCTGAAAGAGTTTGTTCCAGCTTTACAAGAGAGACAGAAATGGCACAAACCTCGAGGAAATGCTCAAGTTGGAGACTGGTTGCTTCTTGTAGATCAAGGTCTACCCAGGGTGTCAGATGAGAACACATATATCTTAACAACAGATGCAGATGTCAAATTCACCCATGAATCAGTCGAAGCATTGCTGGATCTTATGACAAGAGACCGTACAGTTGGTGCAGTTTGCGCAAGAACACACCCATTGGGGATTGGCCCCATCGTGTGGTACCAGATTTTCGATTATGCCATTGGACATTGGTTCCAAAAGGTAGCTAATCATGTTCTTGGTTCTGTGCTGTGTTCGCCTGGATGCTTCAGTGTGTACAGAGCTGCTGCAATTCGTGATGTGCTTCCCATCTATGCCAGCAAAGTTGATAACTCGTTTGACTTTCTCACAAAAGATATGGgtgaaGATCGCTGGCTCTGTACTCTGATGGTCCAGGCAGGCTGGCGACTTGAATACTGTGCTGCAGCAGAAGACAGCACATACTGTCCTGACAATTTTGATGAGTTCTTTAAACAGAGACGCCGCTGGATTCCATCTACTTTAGCCAATCTTATACTGTTAATAAGTCAGTGGAAATTAACTGTGGATAACAATGACTATATTTCGTTTGCATTCATCTCATACCAGGCACTGCTGGTAGTTTCAACAATCCTTGGACCTGCCACGGTAATCTTAATTCTGGCAAGTGGATTATCTTACGCTCATTTTCCAATAGACGACAATTTCGCTTTGGTCATTATACTGATAATCATCACTGTGGGGTACACCATCATCTGCCTTTACACTTCTCAAGAGTTCCAGCTCaaaactgcaaaattcttgACGGTCGTCTTTGCCTTATTAATGTCCTACGCGTTAGTGGGCGTGGTCGCTCAAGCAGGGGATGATCTGTACACGCGATCACATCCCCCAACGCCGACCCCAACTCCAAGACATAGACCCCAGCCCACACCAAAGACATCAAGCGCTCACACCACGTCAACTGCTGTACAGTACCTGCTTGCTTCTGTGAACCCGACCACTCAACAGATTGCGAAATCAACCAATCAACAGACCGTGACACCTACAACTTCCAAGTATCCTCCAGATGGTTTACCAGCTGATATCAGCTCACTGTATTTAGGTTCTCTAATTGTGGTATACCTTGTAGCCGCCCTCTTACATCCCACAGAAGCTGCAAACGTAGCCCATGGATTCTGGTACTTATTATGTCTTCCCTCTGGCTATCTGCTGCTGATTGTCTACTCAATTTGCAACATGACCGACCGATCTTGGGGTACAAGGGAAGAAAAATCCAAGAAGGATGATGAAGCCCCCTGGTACGTGACGTTGTGGAAAAAGATGAAGCAGCTTTGTTGGTGCTGCAGACCTGAGCCTTCACCACCTGAACCCCGTGAACCCCGTGCGGTCAGCAGTGTTGATGGAAGTCCACTTGCATCGTCTTCTAGTAGTCCCACGGAGGAAAATTCTTCTGCATCCGACGTACAACCATCCGAAGACGAAAGTTCCATTGTTCAAATTGAGGAAGAAAAATCAGGTCAGGAAGGCACAGCATCCTCACCAGGTGATGAAGAAGATGGTAGCAGGAAACTTCCCGTTGAGGCACCGTCCAAATCGGCTCTTAAGAAAACAATGGATAGATGGAAAACCCGTGACCCCCAGAGAGAAGACAGCGGCCGCTTCACAAAATGGCGATACCCTGGGGACAAGAAAGTCACATTTGCTAATAAGCTCCCACGGCTACATCCAGAAACATCAGTGGAAGACTGGCTCCAAGGAGAATTTCTTGAATTATACTTGGGAAACTTCAAAGACAATGGCTACGATAATATAAGCTTTATTGCTGGCATGACAGACAGGGATTTGAAGGCCATTGGAATTGACAAACGTGGTCATCGAAAGAAGCTCGTCTATGCGATCGAGAAACTTCCCCAACTGGACATTGCACAGGAGGTGCCGGGAAACGTCGAAGATTGGTTGACGGATATTGGTCTTGACGAATACTGGGAGAAATTTGAACAGAGTGGCTACACTGAACCGCGCATGCTCGAAGATCTCAAAATTATGAACAAGGACACTTTGAAGAATGACTTCGGTATATTTAAGCCAGGACATCTGGACAAGCTATACAAAGCTATACAGAAAGTACAGTACCCAAGCGAATCTCAGAGAAGAATTCGCCGTGCGCgtgaagaaacaaacaaaatcgtTGTTTTGGATTTAAAGACGGACAACCAGGACGATGGATTGGAATATTACTTCTGGGATGGTCTGCGTCAAGAATGCCTTGTGCCTGAATCTGCCATATTTGGTGCAGTTGAGGAACTCAAAGAGAAGCTTGAAGAACTGCGTAATGCCACCCTGTTAGTGTTTGCTGTATCCAACCTCATCTGGATAATATTGCTTTTGACTCTCGTCcgccaagagcatttgaaagtCATGGGAACTAATGCCATCGGTTTTGCTTTTCTCTCTATATATGGATTTGTTATTGTGATTCAGTTTCTGACCCTTCTCTGGCATAGGATGGCGACATTTTTCCACGTAGTCGCACGCGCACCGTGGAAGCGTGGAGCCCTGCACATGGTGTGGGCATTTGATGATAGAAATCTGCCGCCTCCCCCCGATGAGAGGACCCTGCAAGCAATTCGGCAGCAGCGAGGTCGCGGCAGACCGCGTCGACGGCGCCATACTCAAGATAGTCGCCGGTTGTCTTTTCAAGGAAGCGAAGGCAGCGTCCCTGGCACGAGTGGAGAAAGAGACCCACTGTTGATTGGGAGACCACCTTCACAAACTGGTTATGGGACAAGAGAACCCGGTCAAAGTAATAGGTTACCTCGACTAGTGTAA

Transcript

BRAKERNUST00000045916

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G5EBQ8	Chitin synthase chs-2 OS=Caenorhabditis elegans OX=6239 GN=chs-2 PE=1 SV=1
Q8T5G8	Chitin synthase OS=Meloidogyne artiellia OX=42426 PE=1 SV=1
G5ECD6	Chitin synthase chs-1 OS=Caenorhabditis elegans OX=6239 GN=chs-1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001011 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03142 all species →	Chitin_synth_2	Chitin synthase	Family	Interproscan
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR004835 all species →	Family	Chitin synthase	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22914 all species →	CHITIN SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004100 all species →	Molecular Function	chitin synthase activity	Interproscan
GO:0006038 all species →	Biological Process	obsolete cell wall chitin biosynthetic process	Interproscan
GO:0016758 all species →	Molecular Function	hexosyltransferase activity	Interproscan
GO:0030428 all species →	Cellular Component	cell septum	Interproscan
GO:0071944 all species →	Cellular Component	cell periphery	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00698	CHS1; chitin synthase	EC:2.4.1.16	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.