Detailed information of BRAKERNUSP00000046259.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029207706.2, DEAD-box ATP-dependent RNA helicase 39-like isoform X4 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q56X76DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2
Q5VRY0DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1
Q9NUL7Probable ATP-dependent RNA helicase DDX28 OS=Homo sapiens OX=9606 GN=DDX28 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004271 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270
all species →
DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014
all species →
DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR011545
all species →
DomainDEAD/DEAH box helicase domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47960
all species →
DEAD-BOX ATP-DEPENDENT RNA HELICASE 50Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003724
all species →
Molecular FunctionRNA helicase activityInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000046259.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP