Gene detail

Detailed information of BRAKERNUSP00000046310.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029186880.2, conserved oligomeric Golgi complex subunit 6-like isoform X1 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000046310

atggcggaaaaTAGTGAGTCACCCAATAATCCGCTATCgagaaaattaaacaagatcTTGGAAATCAGGCTCGACAATGACAAGGAAATGGTAGAGGCGCTCAAAGCCTTGTCGACGTTTTTTGTGGACAACAGTTTGAGATCCCGTAGAAATCTACGTGGTGACATTGAAAAGAGAAGTTTGGCCATCAATGAAAGCTTTGAAAGTGCATTTAGGGAAGTGAAGCAGCAACTGGATGACGTGCATGCTGATATTGAACAAATGAGCAAGTGTTGCACGGAAATGACAAGCAGGCTCAAGTCTGCAAGGGATCAGACCTCAGACTTgatcagcaaaacaacaaagttgCAGAGTGAAAGTCAAAGAATACAGATGAAGGAAACAGTTGCTGGTGAATTTATTTCAAGATTCCAGCTAAGACCAGAGGAATCGCAAGCTTTAAAGGGGACAAAAAATGGTCCCATAACAGAGAATTTCTTTCAAGCACTCGGAAGAGTAAGAGAAATTCACAACGATTGCAAAGTGCTGCTAAGGACAAAGCAACAAACAGCAGGTTTGCAAATTATGGAGGCAATGGCTTTGCATCTAGAGTCCAGTTATGAGAAGTTGTACAGATGGACACAAGATGAGTGTAGAAGTTTAACAGGAGACCTTCCAGAtctttcgagcatgctcagtagAGCAATGGCTGCTCTGGAAGACAGGCCTGTGTTATTCAAGTATACTTTAGATGAATATGGCACAGCAAGAAGAACAGCGGTTGTAAGATGCTTCATTGATGCACTCACGAGAGGAGGCCCTGGTGGAACTCCCAGACCAATCGAATTACATTCTCACGATCCAGTAAGATATGTTGGTGACATGTTGGCATGGCTCCACCAGGCAATAGCTTCAGAAAAGGAACTCTTGCATAGCCTGCTTAAAAATGCATCAACATGTGACCAACAAATACAAAGGGAAATTCTTAGTCATATTACTGAAGGAGTCTGTCGACCTTTCAAGGTTCGAGTTGAACAAGTTATAGTCGCTGAACCAGGAGCAGTGATGCTGTTTAGCTTGGCAAATATTCTCAAGTTTTATGGTACAACAATTGGGTATACTTTAGATGAATATGGCACAGCAAGAAGAACAGCTGTTGTAAGATGCTTCATTGATGCACTCACGAGAGGAGGTCCTGGTGGAACTCCCAGACCAATCGAATTACATTCTCACGATCCAGTAAGATATGTTGGTGACATGTTGGCATGGCTCCACCAGGCAATAGCTTCAGAAAAGGAACTCTTGCATAGCCTGCTTAAAAATGCATCAACATGTGACCAACAAATACAAAGGGAAATTCTTAGTCATATTACTGAAGGAGTCTGTCGACCTTTCAAGGTTCGAGTTGAACAAGTTATAGTCGCTGAACCAGGAGCAGTGATGCTGTTTAGCTTGGCAAATATTCTCAAGTTTTATGGTACAACAATTGGGAGCCTTATTGGCGAGGAAGCTTCAGTTACTGCCACAGTTTTCGACATGAACGCCTTGGCGCTGAAGATGTTCTTCAACAGTCTGAACTGTCATGCAAGCAAATTACTTGAAAAGATTGAGCTGCCTCCTCCGGATCTTAGTCCGACCGAGTCATTAAAGGAGACCATGAGTTTGTTAAAAGACGTGCTGACTTCTCACGATGCCTCCGTTATTCCGTTAGATGCCAGACAAGCTGATTACTCGCGTATCATATCTTGTCTGGTTGATCCACTTCTTCAGATGTGCAACATGTCTGCTAGTCACCTGAATGCATCCGACATGGCTGCCTACATGATTAACTGCATTCATCAAATACAGAGCACATTAGCAGTATACGAATTCACggataaacatattgaaatgCTGGCTGGACAGGTGCCATTATCATCCTTACATGGAATGGATGCGCAAAGTGTCAAGGATGCTATGAATTCGTGGCCTTGGTCGAGCTGCAAACAAATAAAGGCTTACGACAAGAACGCTGTCAGTGGTGTGTACCCTATTTATCTCAAAGACCCTCCCCAGAGTATTGATGTTTACTGTGAGATGGCATTGGAAGGCGGTGGTTTCACCTTTTTACCTCGCTACTTTACTCGCGTGAAAAACGCCCAAGGGATTGTCGACGCTCTCTTCACTGAAAAGAAGAACGTCTTACTCAAGTTGAAGCACCGTCACCGGAGAACGCAGTACTACACTCTTATCAAGCCACTTGCTAACTGGAAAAATGTTGACTTTGGCATCAGAGTGAATAATTACTCTGATTATACCCGGCCGTTCAATAATTTCATGCGCGATTACATCATATTGGGGATCATTCCACGATCATTGGCGGCAGGAAAAAACAGAATCCAAGGCTTCGTTTCCAACGGTCGCAATGTCAGTTTTCGTAACTGCGACCGCAATCCAAACAGCTACTTTGCCTTCATGCCAAACCACAATCAACAAACACCGTCAAATTACTTTAGTCAAAACCCATTTTACGAAAGACGAGGAGTCGCTGTCGACTGGCGTAATACAGCGTTACCCAGTAGCAATCCCATCAGGATGCCCAATGGATACTTCTTCCTGACTGAGTTACACTTCGGTGGCTGTGGCTGCTACACTTCCAGTGACCGTTGGATCGCATACCAGGGTACTGCCATTGGATTTCGTTGA

Transcript

BRAKERNUST00000046310

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SZI7	Conserved oligomeric Golgi complex subunit 6 OS=Bos taurus OX=9913 GN=COG6 PE=2 SV=1
Q68FP9	Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus OX=10116 GN=Cog6 PE=2 SV=1
Q8R3I3	Conserved oligomeric Golgi complex subunit 6 OS=Mus musculus OX=10090 GN=Cog6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004781 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06419 all species →	COG6_N	Conserved oligomeric complex COG6, N-terminal	Repeat	Interproscan
PF20653 all species →	COG6_C	Conserved Oligomeric Golgi complex subunit 6, C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048368 all species →	Domain	Conserved oligomeric complex COG6, N-terminal	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR010490 all species →	Family	Conserved oligomeric Golgi complex subunit 6	Interproscan
IPR048369 all species →	Domain	Conserved Oligomeric Golgi complex subunit 6, C-terminal	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21506 all species →	COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0017119 all species →	Cellular Component	Golgi transport complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000046310.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.