Gene detail

Detailed information of BRAKERNUSP00000047601.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_044169146.1, DNA mismatch repair protein MutS-like [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8EZG1	DNA mismatch repair protein MutS OS=Rickettsia canadensis (strain McKiel) OX=293613 GN=mutS PE=3 SV=1
A8GMX2	DNA mismatch repair protein MutS OS=Rickettsia akari (strain Hartford) OX=293614 GN=mutS PE=3 SV=1
A9M792	DNA mismatch repair protein MutS OS=Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666) OX=483179 GN=mutS PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005817 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05190 all species →	MutS_IV	MutS family domain IV	Domain	Interproscan
PF00488 all species →	MutS_V	MutS domain V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007696 all species →	Domain	DNA mismatch repair protein MutS, core	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000432 all species →	Domain	DNA mismatch repair protein MutS, C-terminal	Interproscan
IPR036187 all species →	Homologous_superfamily	DNA mismatch repair protein MutS, core domain superfamily	Interproscan
IPR007861 all species →	Domain	DNA mismatch repair protein MutS, clamp	Interproscan
IPR045076 all species →	Family	DNA mismatch repair MutS family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11361 all species →	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0030983 all species →	Molecular Function	mismatched DNA binding	Interproscan
GO:0003690 all species →	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0043504 all species →	Biological Process	mitochondrial DNA repair	Interproscan
GO:0140664 all species →	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000047601.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.