Gene detail

Detailed information of BRAKERNUSP00000048017.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_044162748.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114953833 [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000048017

ATGATCAGGAGCAGGGAAGCTAAAGTAACGCTGATTACACCAGGGAGAATTAAGATTGTTCGATTACGTGAGGAGCTACTATTTGAGGCAAGTGCTACTGGGCTGTATATGTCACTGGATGGAAAGCAAGTCACCGTCAATGACACAGAACTCCATTTCGTCGACTCTAGCATCTCTACTGTGTTTATATTTGATTCCGTCATGAAACATCTAAAAATGATCCAAAGAGGGAACGAGACGATCACCATTGAGTATTTGCAGAACAGATCTTCAATTTTCAAGCATTCGTCTGGCGgaaaaataaatgtgaaataCAACGACAAAGGACTTCTTCGCGAGGCTCGGTTAGAAGATGGAGCCGGTAACGAACAAAGATGTTTCTACACTTATGATTGGAACATAGCTGCATTGCTGTCCGTGACCGTGGGCGAACAAACTACACGTTATACCTACAGCTTAAACGGTGATCTGACAAGTATTATTTACCCTACTTCGACTACCGTCAAGTATTCCTGGAACCAGTATGGACTCCTGAGTAGTATAACAGGCTATAACCGGGAAAACAAGTTTGTTCAGGGAATGTATTTCTCTTACGACTGGAATGGTAAGGTTACTATGTCCAGACTCCCACAAGGCGACTCGGCCGTGCTTGTGTTTAATGAAGATGCGAGAATGATGGATATAGTAGGCGGAGGTTTTAGCGGTGTGCGATTTGACAGTGTTAAAAATGATGACCAGGTTGTGCGAATCATAAAGCAAGGAGAACAGGTTGTAATGAAAAGAATGTTCAACAAAAAGACAAACACCATGTCTGTAGTGGACGCAAACGATCATAAAACAGATTTCCTACTACGGGAGAACTGGGATGTTCTAAACACCACGGATCCTGAAGGCTTTGTTTATCAGAACATATATGATAACAAAGGCAAAATGATCAAGTTCAAATACCCTGATGGCGAGAGCGAACTCACTGATTATGATGGCTTTGGCCGGCTGGTAAAGTTTGCTGGTAGAGCTGGCAAGGAAGTCAAGTTCGAATACGATGAAAAAGACAGGATTGTCAAGAAAGATGTCGATGGTCTTAGCTCTTCGTATTTCCTTCGTGATGGCTACGGAAATATCATTCAAGCGACAAACGATATTGGAGcaataaacattgtttttgacaGAGAAAAAAGGCCTTCTACTGTCTCGTATCCTAATGGTCAGAAGCTTTCTTACAAATTCAATAATTTCCAACGTCGTGTGGCTCTCAAAATCTCCGGGTTGAGCCTGGTTTACAAGTATGACCGGTTTAATCGGTTATCGGAAGTCGTGCGAATAGACGCCAGTGACAGAGGTGCTATCCTATTGAAGTTAGAGTACAATTCGAGGGGAATGTTATCTAGACGGGTCCTTGGAAATGGAGCATATTCCGCGTACGTTTTAGATTCAACTAATTCCAAACTGTCGCGAATGGTAAATTATTTTCCAAATGGAAGCATTTCTTCCTATTTTGAATACAACTATGATAGTAAAGGGCGTATTATTCAATTAAATACGACCTCAGGGAGCTGGCATTATAAGTATGATGCAGCCTCGCAGCTCATAGAATGGACAGATCCGCAGGGAAAGATTGTTCGTTGCGCTTACGACAAGAGAGGAAACAGAGTATTCGTTTCACAAGAGCCTGGTAACAAGACCTTGTACGCTGCAAACGAAGTTAACCAGTACAGCTCGGCAGGAAGTTATGATATTAAATATGACATGAATGGCAATATGGAGGAAAAGACTAACAGGGAAGTGCGGAACGATAGCGCCAAATTCAAGTTTAGTGCCGAGGATTTCTTGGTGCAGGCTGAAACTCCGAACAAAagATGTAACTTTGTTTACGATGGCTTCGGAAACTTGTACAAGAAGACATGCGGTCAATCAGAAGTGCAGTACATCATCGATCCATTTGGGAATCCAGGAGCTGATGTTGTTGGTCAGATCTCTGGTGGAAATGTAACATACTTTGTCCACTGTGAAGAGCTTGGATTGGTTGCTTTGGTTGACAAGAAtggaaatttgttttattacgAGTTTGACGGTTTAGGATCTGTCGTAGGAGTACTGGGTCCCAGTGGTGATCGTGTCAATCGCTACAGTTATGACCCCTTTGGCAGAATGTTGGAATTTGACGAAGCGTTGCCACAGGATTTCACGTTTATTGGTCAATGGGGAGTAACTGCAGACCGTGAACTAAAGGATATTTTCTGGATGAGATCCAGACACTATGATGCACAGCTTGGAAGATTTCTTAGCTTTGATCCTCTCGATACATACCCTCACCCAAACTCGCAGGGTTTGCAGGCTGGAGGAATGCAGGCTCTTGCTATGCATTTGGGTCACCAAAGCAACAGACTGATCCAGAACTGTTTTGTACGAACTCTGAATAATCTGTCAGATGCTGGAACCAAAGAGGATGGACTTGATACATGTAACTTGCTTCAAATATTTGGTGGCATTGAGGCTCTTGTCAGGACCTGCATGTGCAGGCTGAAGGCAGTGTTACTGGTTTGTGCCCTTGGTTATCTAACAAGTCGTCATGAAGATGCTGAAAAAGCTCAAAATGCAGTACGAGTGTATTTTGGCTGGCCACTTATCAAGGCAGTGATTGGACTCATGAGAAATCTAGCCCTGTGCCCCTTAAACCATACTCCGGCCGAGAACATGGTGGTCTGCCTCAGCTAG

Transcript

BRAKERNUST00000048017

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q29I35	Armadillo segment polarity protein OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=arm PE=3 SV=2
P18824	Armadillo segment polarity protein OS=Drosophila melanogaster OX=7227 GN=arm PE=1 SV=1
Q7QHW5	Armadillo segment polarity protein OS=Anopheles gambiae OX=7165 GN=arm PE=3 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001664 (this species only)

Pfam domain

No Pfam domain signature was detected for BRAKERNUSP00000048017.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR006530 all species →	Repeat	YD repeat	Interproscan
IPR013284 all species →	Family	Beta-catenin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45976 all species →	ARMADILLO SEGMENT POLARITY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0016342 all species →	Cellular Component	catenin complex	Interproscan
GO:0019903 all species →	Molecular Function	protein phosphatase binding	Interproscan
GO:0035257 all species →	Molecular Function	nuclear receptor binding	Interproscan
GO:0045294 all species →	Molecular Function	alpha-catenin binding	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0060070 all species →	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0140297 all species →	Molecular Function	DNA-binding transcription factor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000048017.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.