Gene detail

Detailed information of BRAKERNUSP00000048187.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029198792.2, uncharacterized protein LOC114963732 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000048187

ATGTATCACGAAGAGGATTATGAAATGGAACAACTGCTTCGCTCCATCCACGATGTTGATACACACAGTCAGGGATCTGGACGCTATTATGAGTCACACATCTTTTTTGACGGCTGTGTCAGAGCTGAAAAACTCAACAGTTTTGTAGTGCAGCTGGCCTCCTTGGTGGAAAAGACTCTAAAAGTGCCAATAAGTGACTCTACCAAACTAAAAACCCCTTATGGAATGCAGCTCAGGTGGAAGCTTCCCGGTGGAATGGATTTCACCGTTCATCTCAAAGATAATGTCAAGgtaaaaaacaaaaaacgttgGAGCCAAGTAATGTACATGTCATACGTCTTAGATCACAAGGAGAAACTTCTGGGAGCAAACGACAATCAGTGCTTCATCTTGACAACAGATGCTGACGTTAAGTTTACGCATGAGTCCGTGGAGGCGTTGATAGATCAGATTGTGGAGGATCCTCATACTGGTGCAGTTTGCGCAAGGACTCACCCGATGGGAAATGGGCCTGCTGTTTGGTATCAAATCTTTGACTATGCCATTGGTCATTGGTTTCAAAAGGTATCAAATCACATGCTCGGTTCCGTGTTGTGTTGTCCGGGATGTTTTAGCCTTTACAGATGCCAAGCTGTTCGAGATGTTTTATCAATTTACGCCACGGGAGTGGATCATGCCTTTGATTTCCTTACAAAAGATATGGGTGAAGATCGATGGATGTGTACTTTGATGATACAGAGAGGCTGGCGATTGACCTATTGCGCAGCCGCAGTCGACAGTACCTATTGCCCGGAGAGTTTTGATGAATTCTACAAACAAAGGCGCCGATGGACTCCGTCAACCTTAGCCAACTTGGTTTTACTCATCAGAGAGTTCAAAACGACGTTGAGGGCAAACGAACACATCTCTTTGCTCTTCATCTTTTACCAGGCCTTTCTTGTTTTCTCTACTGTTATCGGaccctcaacagttattttgattattgttgGCGGAATCATGTACTCGGGAGTCAATATGAATGAAATAACGCTGGTGGTTCTCATCTGCATTCTGGTTATCGCATACGTAATGGTGTGCTTATTTACTTCACAAACCTTCCAACTTAGAGTGTCTAAAATATTAACGTTTGTATTTGCTGTGATCATGTGCATTGTTTTCATCGGAGTTGCTGTCCAAGTCTCAAGGGAATTACGAGACACAGGAGCAGCATCAAAAGAAGAAACAGCTTCTCAGCCAAACATGACAACTTTTCATGATTCTCAACCTTTAGAGAGTCAACTACCCGTTAGTGTCAGTTCGCTTTATTTAGCTGGATTGTCTGGCATGTTTATCGCTGCAGCAATATTACACCCAAAAGAGTTTACATGTCTCTTGCACGCGGTGTGGTATCTCCTGTGTTTGCCCTCTGGTTATCTTCTTCTGACAATTTATTCCCTTTGCAATCTAACGGACAGGTCATGGGGAACAagagagggaaaaactgtgtCGGAAAGTGAAGATTGGTACAAACTTTTATTCAATCACTTAAACAAGCTATGCATATGCTGTTACCAAAACCGAAATGAACCGAGTCAGGTTCCTCAAGTCTTCAGCCAGGAGCATCAAGTCGCAGGTAGCAAGTTGCACGATTCCTCAGACCaaactaaaaacaaagaaactatCGTCACCATTACAGAAGAGGGAACAGTCAAAACAGAAGACGCGAAAATCCAAGACACGAAAGTTGTCAAAACTCCTGATGTAAAATTCAAGGATGCGAGATCGGAACGACCCTCACAAACCATTATCCTGTATGAGGAAGGTGGTGGTGTTCTGACAACAGACCACGAAAATGATAGTCTAAACATTTCTAACCAAACGGTGTACTCTGCGGATGAAATTCCAAACAAGAAAAGAGCGATCAATActtcaagaaaaataaaaacaagagaatCTACAGAACTTACTGAGGGACGGCTCCAATTGAAGAACTCTCTCACTTTGCGTGAACAAGCAGTCCAAACTGAGGAATGCCTAGATGATCAAATTTTATCGTTTTCACGTCTTAAAGAGAGAAGCCTGCCACAGAAGGTAGAATTTTCAGATGACGATGGGAATTTTCCACAATCTCAGTCCAGCAGTGAAGGAAGCGCTTCTTTAAGTCCAATGAGAATTGGCAATCCCCGTTCATACAATTCATATCTGGCAAAGAATGGAAACGAATCTAAAGAAATTAAACGTGATCCTGTAAATATCCCGTCTCAGTTAAGTAAAGAACAAGGAAAGCTAGAAAACGACATAGAAACCTCTCCATATTCAGTGTCTGCATTAGTCTCCGCCTCGACATCGATCATGGCTGATATAGATGAGGATCAAAAACAAGGAAGTGAAGATTATTCGATGATGATGTCGTTCACGCCATTGGCATTTAGTGGTGATCGTCCCGAATCAGCGTTGAAAAAGGAAGCTTCCTACTCGAATCTCAACCAACCGGTAGAACGATGGTTGACTGAAGAATTTATGAATTATGCAAACAATTTTCGTCAACATGGATATGACACCGTGGGATTTTTGCCTGGAATGACGGAAAAGGATCTTGAAAATATTGGCATCGAGATAAGAGGACATCGCAAGAGACTCCTACGAGAAATCAAGAAAATCCCACGGGTAGATATTGAAGAGGGTATTCCGGACAGTGTTGAAGAGTGGTTGAAGGAACTTGGTCTGGGGGAATATTGGCCCACTTTTGAAAGGAGTGGGTACAAAGAGCCAAGCGATTTGGAAGatttaaaaaacatgaaaagagATGGCTTAAAGGAAACGTTTAACATTTACAAGACAGGCCATTTCAAGAGACTGTCATCTGCGATTCGGAAGCTCCAATACCCTAATCAAGGACAGAAGAAAATCCGTCTGACGCGCCGTGAGCTCGATCGTCTTCCTTTAGGCTACCTGGATGATATCGACCCCAACGAGTGCGCATTTTGGCATGGATTACGTGAAAGGTGTCTGATTCCTGAGCTCTCTGCTTTTGATCAAACCTCGAGCCTCAAGGAAAAACTCGTGGAGCTTCGAAACACATCATTAGTGGTGTTCGCAGTCACAAATGCACTGTGGATAATCATTATACTGACTTTGGTTCAACAAAAAGACCTTAAAGTATTGGGTGTCGATATTATAGGGCTCGGTTTTCTCACTATCTATGGGTGTATCTTTGTTATACAGTTTCTTGCCCTTTTAGGTCATCGTTTTAAAACCGTAATTCATGTTTTAGCGCGTACCCCTTGGAAACTAAGTCCAAAAGTTGGAAACAATCGTGTTTCTTCCGCTTAA

Transcript

BRAKERNUST00000048187

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G5EBQ8	Chitin synthase chs-2 OS=Caenorhabditis elegans OX=6239 GN=chs-2 PE=1 SV=1
Q8T5G8	Chitin synthase OS=Meloidogyne artiellia OX=42426 PE=1 SV=1
G5ECD6	Chitin synthase chs-1 OS=Caenorhabditis elegans OX=6239 GN=chs-1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001011 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF03142 all species →	Chitin_synth_2	Chitin synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR004835 all species →	Family	Chitin synthase	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22914 all species →	CHITIN SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004100 all species →	Molecular Function	chitin synthase activity	Interproscan
GO:0006038 all species →	Biological Process	obsolete cell wall chitin biosynthetic process	Interproscan
GO:0016758 all species →	Molecular Function	hexosyltransferase activity	Interproscan
GO:0030428 all species →	Cellular Component	cell septum	Interproscan
GO:0071944 all species →	Cellular Component	cell periphery	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000048187.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.