Gene detail

Detailed information of BRAKERNUSP00000048469.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: CAH3145403.1, unnamed protein product, partial [Porites lobata]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8L3X9	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KAS PE=1 SV=1
Q0VCA7	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus OX=9913 GN=OXSM PE=2 SV=1
Q9NWU1	3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens OX=9606 GN=OXSM PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002567 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02801 all species →	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF12947 all species →	EGF_3	EGF domain	Domain	Interproscan
PF00109 all species →	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020841 all species →	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR000794 all species →	Family	Beta-ketoacyl synthase	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR014031 all species →	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR016039 all species →	Homologous_superfamily	Thiolase-like	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR018201 all species →	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR024731 all species →	Domain	EGF domain	Interproscan
IPR014030 all species →	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11712 all species →	POLYKETIDE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004315 all species →	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000048469.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.