Gene detail

Detailed information of BRAKERNUSP00000048846.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029184619.2, uncharacterized protein LOC114952759 [Acropora millepora]
Species abbreviation MCACT · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000048846

ATGAAAGGCTGGTTATTTACAAAAGAAATGGAACTTGgggtattttattttatcgttGTACTGACTGTTTTGTATTTGGTGCGTGAAACGTCTGGAGCTGTAGTAAATATTACCTTACAGAAGTTTGTGGATGGTGTTCTTATGGTTCCTGAAAATCAAGGAGAAGGAAGAATAGAGGTTCAGCTATCAGAGGCTGTTAATTCAATGAATGCTACAGTTAACTGTATCTCGTTGGAAACTGCCCCTGGTCTGACAGCTGTGCAGTTTGCATCTATGCTTGCTTCTGTTAATACAACACAATTGAATGTTACATTCAGGATCCTGTCTGCTGGAAAACCAGTTGCAATCCAATGTTCTGCTCAGAGTCAAGGAAATGGTACACAGTTTACATCCTCTGAATCAAGAGGAAACACTGGattgttGCAAGTAACCAAAGCACCAACTGTTCACATTTGCCTTGATGTTGTTTTGCTTCAAAAGTATCGGCCAAAATCAGTCTTTCAAGTGCAGTTCAGTGAGACGATAAACCAGTTCCCAGTTCGTGTAAGGTGTTCAACTGTTAAGCCTGATGCTGGTGCGCCACAAGGATTGCAGATATCTTTTGCAGAGACTTTTGTGGACATTGATCAAACAACAGCCGAGGTTTCTTATGAGATTGTGTCTCTTGGGGTTCCTGTACAAGTGATTTGCAGGGCACAGTCCACCAATGGGACTGAGCCGATACTACGAACTCAGCCTGCTGTTTCAACACCATTAATTGTATTTTCAAGCACTGTAAACCAAACAGCTTCAGTCAGTGTGAATGAGACATCCATTGTCAGTGTGAATGGTCTATCCTCGCTTACTTTTGACACGTCAGCCGTGACATCAGTCATGTCTGTTTCAAGTGTGATTGCAACTGCTTCCCCTGGAGGTGCCTCCAGgaaaagaagaaggagaagcATTTTGTCCAGCACTGACAGAACTATGATTCAGTATCGTTTCAATACATCAGCAGGACCTGCTGTTACATTTGCACTGGATTTGTCTCCGTTAAGGATTCTCCCATTAACAGGCTTCATTCGGGCACCTAATGGTAGCTTAAGCGCGGTCCTGGCACTAGATCAGCCCGCTGAAAACACTGTGGATATCACTTGCTCATTGGATGTTGTGTTGCCTAGTGATGTTTTACGTAATACGCAAGGGAATTGTTCCCAATCAGCCACTGACAAAGTTATTCTTGCCAACAACTCGGTGGAGATTCAACTCAACGCAAAAGAAATCCAGTTTCAGAATAATGAGGTTTTTAAGATCATAAAGTTGAATCTGAGTGGAAGCCCATCTCAGCGCGCGGAGAGCCTGGTACGTCTTACGTGTTGTGGGCAGAGCACAGGTTTGAGCCTCCGATACGCAAATGAGACAGCGGTAGCTTTTGTGTGGGTTGAAGTGCGAGAGCTTCATCCAGTGGACTGGGACGGTATCACGAGCGGACAGAGGAAGACCACACTTGTATCTGATATCGATCTGACCTGCCCTTGTAAcctgaaggaaaattcttgtgATGCTGGCTGTTGCTGTGATCAGGATTGCGGTGAATTTGAAAGTGGGAGCTCAATTTGTATCTCGGGATTCTTTGGCGGCGCCACCTCTGAAAGGCCGTTCGAGTTTAGCTGCCAGGCCTCCTGGCCTGATTCGAAGACATGGCATCCATTCCTCTGCGTAACCATTGACAACAGCCCCTTAACTGGTTACTTTTTCAACTTCACCAGTCCTTCTCTAGCCTTGGATTCTGCCACATTCAATACACTGGCTGGGACCAAGAAAAGAGAACCCTTTAGCTTTGAAGAAAGGGAACAAAGTCAAACGACATTTTCAGGTGGTTTGTACACGGCGGGATCAACGATCAAAACCGCTGTTACTGATGCAGATGCAAACTATGTTGGAGGCGTGCTAAGCTTGCCACAGACTGTGTTTAACCGCTTGTGCTCTCAAACCGCACCAGTAAGGTTTCTTGAAGAGTTTTCGTCTCGCTGCGTTCTAGAGCTGGATGAGACTCTATGTAATTCACAGTCGCCATGGAGTGCTTTGAATTATTTAATGCCTTTAAGACTCAGCCGGCCTGCTTGTTCACTACCTCCAGCAGTACTAGCCCTGGGAAAACTGAGTGATAATGAAGGGGCACCCCCTGAACTTGCTAGCAGTGAAGTACTGTACTACTGCGGGGATATTTCGCGTTATGTTACCATGACAACTGGCTCGATGACGAGTAACTCGTCATCATTATTCGATGGACGCTCAATGGAAATTCCAATGCTTCAAAGATGTGCGTTTGATGACGGTGAAACTTTACCGCCTTCGCCGACTTTTGACAGAACTTCAAGGACGTGTTCGAACGTGGTTGTCAAAGTTGATTATGAATTCAAATGGCGTGAAAGACAAGTTGACGCAGTTACAGCAAAAATTACGCTTGGGAACGTTCAACTTCCCTCACTCCAACCAAAGTCAGGTCTTTCAACATCTGATAGCTTTGCAAACACCCTTGGACAAGTCTTTTCTGTCAAGTTTCTTCATTCTCCACGACTCAACGCTTCTACAATCAGCCAGGTTCCATTTCAGCGCTCAGGGAACCCAGGATACATGCGTGGTCTTCCTGTTGTGAGTCGCAACCTGGATAACAGTTCAGGACAAGTCACATCTGGAAAAATCCAACTGTGGTCCCCAGGTCCCAACAGTTTGTGCGCCGATTCAGCTCTCACTCCAGTCCTTTATGGCGAGGACGCTTTTTCTGGGTGTCTACTGCGATTGTCTTTAGATGACATGCGTAACTGCACGTCATTGAGGGAATTagtattgaccaatcagaatcgtCTAATTCAGGCAACGGATATTGGTCGCAGGGGTAACGCTAAGCTTAATAGCTCAAATGATTGGCTTCCGGTCATAAGATTACAGTACAGTACATGGCACTTCAAGTGTGTCAGTGGTTTCGGCCTGAGCTGTTTCATCAACGATACTGACGCCGGAAGTTCACACGTACTACCCAGTCCTTCTCTTACTTCATCAGCTGTGGAACCGTCGGTCAGTGAAAACCCCGTGAATCATTCAATTTCACCTGTCAATCTCACTGCAGGATTATCCGTTACTCCGTTTCCAAGCTTATTAATGACGCAGACAACAAGCTCATCCGCTGCACAAGTAGCAAGCCCACCTGTCATCTCGACAGCGAACTTCTCAATTACGCAAACAGCAAACTTATCTAACATATCAACAGCAAGCTCACCCGTGACACCAGAGGCAAGTGTATCTGCCGCGACAGGTTCGAAGGTTAACAATACGGGAACGAGGCAGTATGAACCTCGATTCCAGTATTTCATGGTAACGAGCTCTGTTGTTTTCATTAAAGTCCCTGCTGAGAAACCACAGCGAGTCAAAAGGACGGTAGATCAAAGTGGAATATGTTACAGAGATGTGTGCAAGGAAGAGTTGTTCTTTCCTTTGACCACGGCTTACCAAGGCGAATCGCGCGAGAAAACTTTGGCATTGTCACTGCTTTTAATATTCTTGGCGCTGGTTACCTATGCCGTGACAAGACCATGGGGATGA

Transcript

BRAKERNUST00000048846

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3B7D3	Tectonic-2 OS=Rattus norvegicus OX=10116 GN=Tctn2 PE=2 SV=1
Q2MV57	Tectonic-2 OS=Mus musculus OX=10090 GN=Tctn2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005645 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07773 all species →	TCTN_DUF1619	Tectonic domain DUF1619	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040354 all species →	Family	Tectonic	Interproscan
IPR011677 all species →	Domain	Tectonic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14611 all species →	TECTONIC FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007224 all species →	Biological Process	smoothened signaling pathway	Interproscan
GO:0036038 all species →	Cellular Component	MKS complex	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:1904491 all species →	Biological Process	protein localization to ciliary transition zone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19361	TCTN2; tectonic-2	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.