Detailed information of BRAKERNUSP00000049094.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: ERE78880.1, splicing factor 3B subunit 3 [Cricetulus griseus]
Species abbreviation MCACT · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JN52Splicing factor 3B subunit 3 OS=Bos taurus OX=9913 GN=SF3B3 PE=2 SV=1
Q15393Splicing factor 3B subunit 3 OS=Homo sapiens OX=9606 GN=SF3B3 PE=1 SV=4
Q921M3Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004170 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10433
all species →
MMS1_NMono-functional DNA-alkylating methyl methanesulfonate N-termRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050358
all species →
FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR018846
all species →
DomainCleavage/polyadenylation specificity factor, A subunit, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644
all species →
DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005686
all species →
Cellular ComponentU2 snRNPInterproscan
GO:0030620
all species →
Molecular FunctionU2 snRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000049094.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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