Gene detail

Detailed information of BRAKERNUSP00000049277.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029193389.2, LOW QUALITY PROTEIN: uncharacterized protein YMR196W-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000049277

ATGTTAAAGAAACCACTGAAGCGACGCGGAACCATTGTAATCGAACACAACTTGGAGGAAACAAAAAGGCTGGAAGAGGATTCCAAAAGAGAAAAGAATTGGAAAAGGTGGGGTCCGTATCTATCCGAAAGACAGTGGGGAACTGTGAGGGAAGATTATTCCCTCGACGGATCTTGCTGGGACTACTTTTCGCATGACCATGCAAGATCAAGAGCATACCGGTGGGGCGAAGACGGTTTACTCGGGATAACAGACCGCCAATGCCGACTTTGCTTTGGCTTGGCGCTGTGGAATGAAAAAGACCCCATTCTAAAAGAAAGGCTCTTTGGGTTGACTGGAACTGAAGGTAACCATGGTGAGGATGTGAAGGAATGCTACTATTATCTTGACTCAACTCCAACTCACTCTTATATGAAAGCACTTTACAAATACCCACAGAATGAATACCCTTATGGCTGGCTTGTCGACGAAAATCGAAGAAGATCACGAGAAGAACCTGAATTTGAACTAGAAGATACTGGTGTATTTAATGAAAGTCGTTACTGGGATATCTATGCTGAATATGCAAAGAACACTCCAAATGATATCCTTATACAGATAACCATAGCAAACCGTGGTCCCGAAACGGCACGACTCCATGTTTTACCAACACTGTGGTTCCGTAATACTTGGATATGGGGTTGCAGACACGAAGGATGTACTCGGAAGGCAAGCATGAGACAGACAGGGCCTGACACAGTAGAGTGTCGACATGAAACCTTAGGGGATTATTGTTTCTTTGTGGATGTTGGACCTGAAGATGAATTACCAGAGCTGTTATTCACCGAGAATGAAACAAACTCTATGCGTCTTTTTGGTGTAGAAAACTACACGACCTTTACAAAAGACGGGTTTCATCGTTTCGTTATCCATGGAGAAAAAGATGCTGTGAGCCCCAAGAAGAAAGGCACAAGAGTTGCACCTTACTACTTAGTGGAAGTTCCTGCTGGTGACGAACGTGTTCTTAGGTGTCGACTTACGGCTAAAGATGAGTTAGTCACCGATCCATTTGCAGAGAGGAATTTTGGAGCCATAATGCAGAAACGACTGAAGGAAGCAAATGAATTCTATAAAGTTGCCATACCATCTGGCCTCACCCCAGAGGAAACCGATGTGTCGCGCCAGGCATATGCTGGTCTGCTGTGGAGCAAGCAGTTTTATCATTACATCATACACGACTGGCTTTTTGGTGATCCGGAAACGCCATCTCCACCCAGAGAGAGACTCAATGGACGCAACTCTGAAGCTGAGTGGCGACAATTATTTAACAGAGACATTGTATCAATGCCCGACAAGTGGGAGTACCCATGGTATGCCACTTGGGATTTAGCTTTTCACATGCTTCCCATGAGCAAAGTAGACCCTCAGTTTGCCAAGgatcagttgttgttgtttcttcgAGAGTGGTACATGGCTCCTAATGGTCAGTTGCCTGCTTATGAATTCGCCTTGGGGGATGTCAATCCTCCCGTTCATGCGCTGGCGTGTTTGATGGTCTATAAAATGACAGGTCGCAAAGGTGCGCGGGATGACGAATTTCTGGCGCGCTGTTTCCAGAAACTGCTCATTAATTTCACGTGGTGGGTGAACAGAAAAGACCCTTCtggtaaaaatatttttggcgGTGGATTCCTCGGACTTGATAACATCGGGATTTTCGATCGGTCCAAGGATTTGCCAATCCAGGCCAGTTTGTTGCAGGCTGACGGTACAGCATGGATGGCATTCTATTGTGTTATCATGCTCAACATCGCACTTGACCTCGCCGTCGGTGATCAGACGTACGAAGACATGGCTTCCAAGTTTTTTGAGCATTTCACTCAAATATCAGACGCTATCAATCAAATGTCGGACGGAGTAGGCTTATGGGATGAGCAAGATGGCTTCTATTACGATCACCTCAGCTCAGACACGTGTTCCTTGCCACTACGGGTGCGAAGTATGGTTGGGCTTGTTCCCTTAATGGCCTGCCTTGTCCTGGATGACGAGTACGTGAAGAAACTTCCCGGATTTAAAAAGCGGTTGGATTGGTTTTTGTCAAACCGGAAAGACTTGGCCTCTCAGGTCTCATACATAGAGACAGGTGGGGAGAGTCAATACCATCATCTATTGGCCATTCCCACCAAGGATCAACTTACCCGTGTATTAACCTGTGTCCTAGACGAAGAAGAATTCCTGTCCCCTTACGGGATTCGTTCCTTGTCGAAGTTTCACGAAAAGAACCCTTTTTCTTTGACGTTGAACGGGCAATGTTTTAGCGTGAAATATGTCCCCGGCGAGTCAGATACCTACATGTTTGGTGGAAACAGCAACTGGCGAGGACCCATCTGGGTTTGCATGAACTATCTTCTCATCGAAGCTCTGGAACGCTATGATTACTTCTATGGCGACTCGTACGTGATAGAGTGCCCAACCAGGTCAGGGAACCTTATGCGCCTGCGCGATGTAGCCCTTGAACTGAGCAGGCGCGTGGTATCTTTGTTTGTGGCCGATGAGAAAGGAAGGAGACCTTGTCACGGAAATGACGATAGATACGCTAACGACGCACATTGGGTCGATCTGGTGTTGTTTTACGAGTACTTCGATCCTGAAACGGGACGTGGATGCGGAGCCAGtCACCAAACAGGATGGACAGCTCTTGTGAGTCGGCTGTTGGAAAAGCTCGCCAAAAGCCGCTGA

Transcript

BRAKERNUST00000049277

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q04336	Uncharacterized protein YMR196W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YMR196W PE=1 SV=1
O14255	Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC6G10.09 PE=3 SV=1
P53008	Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CWH41 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001748 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03200 all species →	Glyco_hydro_63	Glycosyl hydrolase family 63 C-terminal domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR004888 all species →	Family	Glycoside hydrolase family 63	Interproscan
IPR031335 all species →	Domain	Glycosyl hydrolase family 63, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10412 all species →	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004573 all species →	Molecular Function	Glc3Man9GlcNAc2 oligosaccharide glucosidase activity	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0009311 all species →	Biological Process	oligosaccharide metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000049277.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.