Gene detail

Detailed information of BRAKERNUSP00000049343.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_044164581.1, LOW QUALITY PROTEIN: vitellogenin-2-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000049343

ATGCTCTCGAAATTGGAGGTGTTGCCAGTGCTCCTAAAGATCTTCCGGCAAGTCGACAATGATGTAGAATTGCGCATGgcttgttttgttgttatttgtgACAGCAAGCCTGGTCCAGCTGTGTTCAACCTGATTATTTCGCATCTCCAGCGTGAACGTACCAACCAAGTGCGTTCATTTGTGGTGTCCTACATCAAAGGAATGGCATTCTCCAAGTACCCTTGTGATGGAAAGATGGCTAAAACAGCAAGGTTTGCTCTCAGAATGCTCAGGAAGCACAGGATGGATCTCTTAAAATCAAAATGGTTTCACTGGGGTCAATTTTCCGAACTTCTTCAGTTAGGCGGATCAGTTGACTTGCAAATGATTTCCACACCATCAAGTTTCCTTCCACGATCTATCACCTCAAAGGTCAAAGTTCAAATGCTTGGAAGATCTATGAATTTGTTTGAGGCTGGTGTGAGGGGTGAAGGTGTCCAAGAACTTCTCCAGCGTGTCGTTGGACCAAGGCCACAATCCACTGGAAAGAAAACCCTCCTCAGCAAACTCATGCTAAAGAGCTCATCCTTGTTTGACAAAGAAGTCAGGGAAATTAACAAAATGctTCCAACCGCTCAGTATGAAGAGGAAAAGACCAAAGGTTCCGTTTACTTCAAAATGATGGGCAAGGAACTTTTTTACAACTCTTTCACGGACGAAGATATCAAAGGATTTATTGACGACGGATTTCTCAGTATGCAGGGCGAATTCACAGAACTGCTGAGGAAAGGAAAAGTTTTCAACCTGAccaaggtatttttgcccaTGGAAAGGATGTTTGTACAGCCATCGGTAGTTGGAATTCCTCTGAAGTTCACGCTGCAAAGTGTTTTATTCCTGCATGTAAATAGTACAGTCAAAGCGGACATGAAAGAAACATTCTTTATTCCACGTCAATTGTCGATTAACGGCAAATTGAACATCAGTGTTTTGCACTCCACTTGGGGAAAAATGAAAATCTACTTGCCTCAGCTGGAGACTGGTAGCAAGATGAAACTCGAGATCAACATCACATCTGGTCTGGGAGGTAGTGTGAATTACAACGTCAAGGAAGGCATCTACACTACCGAGCTTGATCTTCCACAGGAGGAACAGCAGATTTTCTCTGTCGATAAACACGGCTGCACTTTCTTAATGTACACCAAACCAGTCAAGGGATTGATGGACAGGCGCTCACTGTACAATAGCACGCGGCTGGATGGAATGGAAATCGGAGAAGTTGCTCCGATCGAAACCTTCAATGATGTAGTGGAAACATTCTTGTTCCCAACTCTCATGGGACCCACTGATCGCCACGCCCACTCTGCAAACTGGACTCTGAgaacacaaaaaggaaaatacctGTCTGTGAATGAACATAATGAACTTACCTTGTGCGAGAAACCTACTGTGTTCCGGGTGATTTTCATCGATAACAATCGCCAATTTGTTAAGCTTTTCGTCCCTGGAAAAGGATATGTGAAGGTTAAGCCAAACTCAAAGGGTTGTCTAGAGATAGACGAAGATGAGCGTTTTCCCAAACTCTTCAAAATCACACACATCAGAGGGCCTCGCCTCATTCGTCTGGAAACAGTGGTGTTTATTCATCCAAACAAATCCCTGAACCCCACAGAATGGACACAAACCACCGCTGCGATGAACACAGACCAAGTGCTGCGGTTCAAGAATTTGATCGAAGACATGAGAGAAGATACGGAAGTGAGAGAAAAGTGGCGTTACCTAACGGATCTGCCATTAGATGATGTCCAGGATCACGACAGGTTCCATCCGCGTCACATGAAGCTCGTTTTTATCACTCCAGTTGAAGGCAAAGTTTGCCTGAGACCTAACAGAAGCGATGAGACTGTGTTCACGGTCAGGCGACAACGGACGCAGGTCAACGAGTTGTGCTATGGCGAGCAGTTGCTTGGGATGGACGTGTGCTTGAGTGGTGAATACATTAAGCCTTTTGTACCACATCCTCCTGTTTTCCCATTCAGTGGTCCGGCAAAGTTCAATGTGTCTATCAAACCAGGCAAGACTCCAGCGCGCAAGATCCAGTTCAAGTTTGAAAAAGGAGACCAGTTTGATGATAAGTACAAAACGTGGAAAGCAAGCATGAACTTGCTGGGAACCAACccggaaaagaaaattgaatcACAAATAACTTACGAtgtaaacaacaagaaaacaaacatttcttttgatctGCTCAATATGTTGCCATGGCTACGTAGAGTCTGTATTACTAGCCACGTGATCAGTGACGCAAATGCCACGTTTAACTTGGAGTTTGGGAAGAGTTGCGGAGAGTATAAGATGGAGACGCTTGTCAATGTTGTGGAACCAGGTCGTCGACAAGTGGATATCACCACATCCTACAAGCTGCCAGATACAGTGACCAGACTTTTTTACAAGCTTTTCAGGGCATTCTCTAGTCAATTTCGTGACAGGCTAAGCGCCTACAAGATCTTGAGAGATGTAAGAAGCCAAGTTCAATTTGTCGTGAAATTCAAAACGGAACAACTAGTGGACCTTGAATTCATCATGCCCTCGCGAACCCTAACAATGGACGATGTCAGAATTGAAACTAATGGCTTTATTCCCCATGGAAACCCAATAATGAACTTGATGCCTTCCTCTTCAAGTGAGTATGCTTATCTGACACGTGGTGTTCACGTGAATGGGGATGTAATCGAAAAGCGAGGACAGACGATCCAGGTGAACTCCATTGCCACAATTGTACAGATACCCGAGAGAGAAGAACTACATGTGCTGTGTGAAAATGGCTTGCAAGTAATAATTGTGCGAGGAATTAAGaTCGACATCCGCCTTTCTCCGTTCTTGTTCAATCGTACTTGTGGTATGTGCGGGGATTTGAATGCTGAGCAATACCAGGATCTCAAGACACCAAGGGGTCTTCCTTAcacctgctcaaacaaacagAAGTATGGACACTTGTGGTTGGTTCCCGATCTCCATGCCAGATGCAGCCAAGATGGCTGTCAACTGAAAAAGGAATATCTCAAGATACCCAAAACGATCGATGGAGAAAAGTTCGACTGCTTCACAACCACCCCGGTCCTCCGCTGCTTTGAAGATTGCCAGGCCACTGAGTCTCAGATCACGGGCTTCCAGTTGACCTGTGTGAAACCCGACAGTAAGGAAGTCTTTAAGATATCTGATGAGATCGCGAAGCGCACTGTGGATCTTACTGGAAGAGACGTCCACTTCAAAGAGAATCTCGTCGAGCATTTCGCGTGCGACTGCAGTGCTTGTAGCCAGCGGAATATCTAA

Transcript

BRAKERNUST00000049343

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9V496	Apolipophorins OS=Drosophila melanogaster OX=7227 GN=apolpp PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003575 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00094 all species →	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF01347 all species →	Vitellogenin_N	Lipoprotein amino terminal region	Repeat	Interproscan
PF09172 all species →	Vit_open_b-sht	Vitellinogen, open beta-sheet	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001846 all species →	Domain	von Willebrand factor, type D domain	Interproscan
IPR015817 all species →	Homologous_superfamily	Vitellinogen, open beta-sheet, subdomain 1	Interproscan
IPR001747 all species →	Domain	Vitellogenin, N-terminal	Interproscan
IPR011030 all species →	Homologous_superfamily	Lipovitellin-phosvitin complex, superhelical domain	Interproscan
IPR015255 all species →	Domain	Vitellinogen, open beta-sheet	Interproscan
IPR015819 all species →	Homologous_superfamily	Lipid transport protein, beta-sheet shell	Interproscan
IPR050733 all species →	Family	Vitellogenin/Apolipophorin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23345 all species →	VITELLOGENIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005319 all species →	Molecular Function	lipid transporter activity	Interproscan
GO:0006869 all species →	Biological Process	lipid transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERNUSP00000049343.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.