Detailed information of BRAKERNUSP00000050373.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029204626.2, zinc finger CCCH domain-containing protein 13-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28GD9Ribonuclease H2 subunit B OS=Xenopus tropicalis OX=8364 GN=rnaseh2b PE=2 SV=1
Q5HZP1Ribonuclease H2 subunit B OS=Xenopus laevis OX=8355 GN=rnaseh2b PE=2 SV=1
Q5TBB1Ribonuclease H2 subunit B OS=Homo sapiens OX=9606 GN=RNASEH2B PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006561 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09468
all species →		RNase_H2-Ydr279Ydr279p protein family (RNase H2 complex component) wHTH domainDomainInterproscan
PF00642
all species →		zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF17745
all species →		Ydr279_NYdr279p protein triple barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019024
all species →		DomainRibonuclease H2 subunit B, wHTH domainInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR040456
all species →		FamilyRibonuclease H2 subunit BInterproscan
IPR041195
all species →		DomainRnh202, triple barrel domainInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13383
all species →		RIBONUCLEASE H2 SUBUNIT BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0032299
all species →		Cellular Componentribonuclease H2 complexInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0006401
all species →		Biological ProcessRNA catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000050373.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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