Detailed information of BRAKERNUSP00000050485.1 in Montipora cactus

Genomic Location: BLFO01004506.1:51600...62429
NR annotation: XP_044169248.1, syntaxin-18-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4VBI7Syntaxin-18 OS=Danio rerio OX=7955 GN=stx18 PE=2 SV=1
Q9P2W9Syntaxin-18 OS=Homo sapiens OX=9606 GN=STX18 PE=1 SV=1
Q5REB4Syntaxin-18 OS=Pongo abelii OX=9601 GN=STX18 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005960 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for BRAKERNUSP00000050485.1 in Montipora cactus.
 InterPro
InterPro termTypeDescriptionSource
IPR000727
all species →		DomainTarget SNARE coiled-coil homology domainInterproscan
IPR006012
all species →		Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15959
all species →		SYNTAXIN-18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0006890
all species →		Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0031201
all species →		Cellular ComponentSNARE complexInterproscan
GO:0005484
all species →		Molecular FunctionSNAP receptor activityInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000050485.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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