Gene detail

Detailed information of BRAKERNUSP00000050506.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: XP_029188464.2, mediator of RNA polymerase II transcription subunit 24-like [Acropora millepora]
Species Montipora cactus · all data for this species · gene families

Sequence

CDS

BRAKERNUST00000050506

ATGGTGGTCAATACAACGGAAGTTCTTCTACAAGCCTGGCGAGAGAGATGGACTCCTTTACAGTGGTTGGTAGAGGTGAAAAAGattaatgaaaaagaaaaaggagactGTCGAGATCTAGCAGaATCCCTTGTGCAGCAAGCTACATTTGGGACTACACCAAGCTCTTTGATATTATCTTACCTTAGTCATGGAATTACCACCAAGtTTCAGAATGTTGTCAAGCACAAGTGCTTATCAGCTTTGCTTGATCTCCTGTTAAGCTTTGCTCCAAGTATAAGTTGCCCTGAGACAGACGAAGAATGCTTGAGATTTGCAGTTTCTTTGCTCAAGATTGTGTACTGGCTGCTTATTGTTGTTACAAGGCTTCTGAAATTGTCTATAGAGTCTGTTCGTCGCTCTTCTGGGGTTGATGTTCCATTTCACTTATCCAATGTTGGGAAATGCAGCAGAGCATTTGGACATTTCATGGGGACAGCATCACACAGAGCTTTGGTTATAGTTGGAAAAAGAGAGGATGGAGCTGCAGCATCTGAATTAGACATCCAGTTGCAAGCTCTTTTGAAAGACCTTATAATGACGCAACCTGAAGGAGTCATCCCTGAAGGCCAACTCCATTTGAAAGAACTTATGGTGAACTTCAATAGGTTGCAGAGCCTGAACTCTTCAGCTGGCAGTGGTGATCTCAGTCCTGGTCGTGTTCCAAATATGGCCATCCAGATTGTTACTCAGTTTCAGGCATTGTTGAGCCCCTCTTATACTCCAGAGCAAGTTGCTGATGTTATGGACAGTGTTATGCATACTCAGAATATAGCAAGGTATCAGCTTTACTTGGAGTTTCTGAGGTCTTCCTTAGTGGGAACATTAGAGGCTCCAGAGAATTCATTGGAGTCAATATTGTGGACAGGCTTTTTGTTCCTTAAGGTTCCCACAGTGATACGTATCATGGAGAGCAGATCACAGGTTGCTGTTCAACTTCAGCCTATCCCAGCTGAGCACACCACGGCCCTCAATGCTTTTCAACTGCTTCTGCAGTTTATTCCTCTTCTGGATGATGCAGACATTAAGTGCAGCTGTAACTGTTACAGAGAAGTCATCCAACAGTATTGCAAAGGCCTCAGTCAACAAGTGGTAGAGAAGATAGAATACCTTATCTCTCAAAGAATGGAGCTGTCATCACCAGAGGTGAGAGATATCTTTGATAACCAGGTATCTGTTTCTCCACCACAGCAGGTTCAGGATGCAGaGAGCAGAATTCTGGAGATCATTGAGGCTCTGGAGTCCGATCTTAGCAGCCGAGATGAGAAATTCCTCAACCCGCTATTAAATTTGGAGAAGTTTCGATGGATGACAGTTGCAGCCGGAAGCGTTGGAAAGCTTCCAAACCTCATAAGAGGACTCATCAAAGTGTCTGATCAAACTGTCCATGCAGCGACAGATAAAGAAGACGTTAAAAGAGGAAGTGTTCGAAGAGAAATGTTCAACACGTCGTTCTTGTTGTTGTGCCACATTGGTCAAGTGTATGGGCGTAAGGTCATTACAGATGTTGTGAACACTCAGGCTCCCCCTTCGTTTGTTGTTCACTGGATCTCGCGTTACATTCCTGATCTTGACAAGTGGCGCGCATTTATTCCCGATACACAGCATTCGCCAAATCAAGCTGCTGTCAATGAACTTCTCAGTCAATTTTTTAGCAATTCAGCATTTCCTGCAAGCCAAGTGAATTGGGATGAACATTGTATGAACGTCTCTAACGCCATGCATCAAGTCATGAAGGCTTTTCAGTGTGACTCCAAAGCTGTGCCACCAGATCAGCTGCAGAAGTTGTGCGACCTTCTGAAGTACGAGGCTCCTGCTCTGGCAGTCTGCGCATGCTCATGGTGCTGTGGCCACATTCATGCTTTGACGCCAGATGAGAGAAAGCATCCCTTACGATTGGTCAATTCTTTGTTGAAACCAGTCAACCCAAAAGGATTTCCTCTTGGGTTTTTAGACAGATGTGCGATGCTCCTTGAGGTCATGGAGAGAATGACATTAGGTGTCGAAGGCAAAGatgACACGTGGGACAGCGGAAATCCAGTGACGGCTGCAAAGCCTGTATTACAGGCTCTTGAAATGCTTTTTGCGGATGTGATGAAGGCGCGGTGCCTGAGCAGTAAGAAAGTGGAACAATTAAGACACCTGTTGACAGTGGGAGgaaaggaatggtttatttACAGTTTAATCAAGgAAGTTTTAAAGTTCAGTCGGAGCGAGGAAATGATTTTGGCTGCGGATCTCTCCAGCTGTCTCCTTATGTTTGATGCTGAGAGTTTGGTACCTTGTCTTCTTGAGCAGGTTCTACCGCTGATCACAAATCACGTGGACGCTGAAACGATCACGGAAGATCCAAAGgGATGGGCGCTTGCGCGGATGACAGCGCACGCGGTTTGTCTGGGACTGAATATCGAACGGACGCGGGCAAAGAAGAATTTGGAAGATGAGGAAATCGAACGTTTCACTTATTCCAAGTATTTGTGTAGAATTGATAAATCACAAGATGGAGCTGTCAGATTTGGGTATTTGAAATACACCACCCCCGTTAAGGATTTGATTAAACACCCAAACAAGATGAGGAAATCAGACAGTTCAGCTCTCTACGATTGGAATTCTTCATTCAGAATACAACAAGGCTTAGTACGATTTTGTGAAGATTTCATTGCCATCATGAAATGCATAGAGGTGGGACCCGTGCCTGCATTACTGGTATCGTTCCTTCAGCAAGCAGTGACCAGTACTGGTGCCAATGTTGGGCCATTATCAGCCTATTTACCTGAAGAATTGGTCAAGGAAATATTGGAGTTATCTCCCGGCTTACAAAGTGCACCCGATGTGCTTCTTGGACTATGCAACATGAAGACTTCCGCGGGACGAAAATTGTGTGCAAAAGCTTTATGTAACAATCTCTAA

Transcript

BRAKERNUST00000050506

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004406 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11277 all species →	Med24_N	Mediator complex subunit 24 N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021429 all species →	Family	Mediator complex, subunit Med24,	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12898 all species →	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15167	MED24; mediator of RNA polymerase II transcription subunit 24	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.