Detailed information of BRAKERNUSP00000051876.1 in Montipora cactus

Genomic Location: BLFO01004623.1:1291...1695
NR annotation: XP_044178879.1, interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog isoform X2 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009338 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16482
all species →		Staufen_CStaufen C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014720
all species →		DomainDouble-stranded RNA-binding domainInterproscan
IPR051247
all species →		FamilyRISC Loading Complex ComponentInterproscan
IPR032478
all species →		DomainStaufen, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46205
all species →		LOQUACIOUS, ISOFORM BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016442
all species →		Cellular ComponentRISC complexInterproscan
GO:0030422
all species →		Biological ProcesssiRNA processingInterproscan
GO:0035197
all species →		Molecular FunctionsiRNA bindingInterproscan
GO:0070578
all species →		Cellular ComponentRISC-loading complexInterproscan
GO:0070920
all species →		Biological Processregulation of regulatory ncRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000051876.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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