Detailed information of BRAKERNUSP00000054617.1 in Montipora cactus

Genomic Location: BLFO01004860.1:1182699...1192502
NR annotation: XP_044174202.1, uncharacterized protein LOC122957837 [Acropora millepora]
Species Montipora cactus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
A2AVA0Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002453 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084
all species →
SushiSushi repeat (SCR repeat)DomainInterproscan
PF00353
all species →
HemolysinCabindRTX calcium-binding nonapeptide repeat (4 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011049
all species →
Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR035976
all species →
Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR018511
all species →
Conserved_siteHemolysin-type calcium-binding conserved siteInterproscan
IPR000436
all species →
DomainSushi/SCR/CCP domainInterproscan
IPR001343
all species →
RepeatRTX calcium-binding nonapeptide repeatInterproscan
IPR050557
all species →
FamilyRTX toxin and mannuronan C5-epimeraseInterproscan
IPR001190
all species →
DomainSRCR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR38340
all species →
S-LAYER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERNUSP00000054617.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP