Gene detail

Detailed information of BRAKERRLHP00000002691.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: KAJ7356319.1, manganese ion binding [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000002691

ATGCAAGATGTTGATTTTGAGCTCATCTATGAACCAAGCAAGGATGAGGCAGATCCACTAGACTTCTTATCAAGACACCCTTTACCAGAAACAGGAAAGGACACTCTAGAAAGAGTAATCAAGCATGTTGTCAATGCAGAATATGCCGTTGTTATGGATCAAATCAAAGAAGAAATGCAGAAAGACAACCAACTCCAGAAGCTAACTGCAAGAATACTCAAAGGTGACTGGGAACAACACAAGAAAGACCCAGACATAATGCCTTTCTATGGAGTGCGACATGAGCTATATGCAGTGGGTGACTTGACCTTCAGAATGAACAGAATCATCATCCCCTCAAGTCTCCAGAGAAGAGTTTTCAAAGCAGCGCACCATCTGGGACACCTGGGAATGACAAAAACCAAGCAGATGCTCTGGGAAAAGTATTTGTTCCCGACCATGAACGTTGTAGCTGTAGATTTTGGAGGACTGTACCTCGATGGCCACTACAACCTGTTAGCCATAGATAAGAGAACAAGATACCCTGAAGTTGCAAAGACACACTCAACAGCTTTCCAACCAACCAAAGATAAGCTGAAAACCATGTTCGCCACCCATGGCACCCCCAGGCAGCTAGAGTCTGACAATGGGCCACCGTTTAATTTCAAAGAATTTGCAGAGTTTGCCAAAACAGAGGGATTCCACCACCATCGCGTTGACAAAGCTGTTGGTCAGGACACTCTGCTGTTTCCACTTAACAAGAAGAACAGTTCTCTGGTCCATGCACCTACAGGCCCTGTTAATAGGGATTATGATGATGTAAGACGATACTATGATGCAGCGGTGAAAGGAATCAAGCGAGCATTAAAGGCTGGCAGTCAGTCTCCCATTCTGGTGACTATTCCTGGTAAAACCTTCCCTAATGCATGGTCTGTGTCAGTGCTTGGAGCTCTTCATGAACTCTATGTGCCTCTTGAATTACGAGAAGCTTATCCAGAAAAGAAGCAGAAAGTGAAACAGCTTGGAGTAGCAGTTCTTGATGAATGTTGCAACTTGGACTATGTCACTGGTATAGATTCTGGAAGGTTTGTTTGTCGAGACATTGGTGGATCTGATCCAGAAAGAATGGCAGCTCCAAGGGTGGAAGAATACATAACAGAATTGTTCAAACATTCTGGACATGTCAAGGTGTCAGTTATCAAAGATGTCAAAGAGTTTGAAACAAACTATCCACTGTATGCAGCGGTCAACAGGTGTGCAAGAGTTGTTGATAGACACACTGGCAGAATGATCAATCTGGAATATGTTGGTGAGGGAGAAATCACAAAAACTGTCCTTCTAGTTGGAAAGGGTGTGACTTATGACACAGGAGGTGCTGACATTAAGGCTGGTGGAGTTATGGCTGGAATGAGCAGGGATAAATGTGGAGCAGCAGCAGTGGCAGGGTTTTTTCAGAGTCTGGCCAAACTGAAGCCAAAAGGAATAAAAGTTCTTGGGACAATGGCCATGGTGCGCAACAGTGTAGGAGCAGAGTGTTATGTTGCTGACGAGATCATCACATCTGCTGCTGGGACAAGGGTGCGAGTTGGTAACACTGATGCCGAGGGGCGTATGGCTATGGCTGATGCTCTTCATCACATGAAATTGAAGGCTCTTGATGAGAACGTTCCTGCCCATATTGTAACCATAGCAACCCTGACTGGCCATGCTATTATTGCTATGGGCCCTGCCTACTCGATTGTGATTGACAATGGACCTGCAGCTCGCACCACGTTTGCCCAGAAAATACAAGAAGCTGGTCATGATATGGGAGATCCTTTTGAGATATCAACAGTTCGTAGAGagGACTATGAGTTTGCAAAAGCCAAGTCAGAGTATGCAGACGTATTGCAGTGTAACAATTCACCGTCCAGCAGAACTCCACGAGGACACCAGTTTCCTGCTGCATTCCTCATCAGAGCAGCTGGATTGGACAAGcATGGTATTGACTCAGACCGTCCTGTCTGCTACTCCCATTTTGACATTGCTGGATCAAGTGGCGACTTCCCACAAGTCCCAACTGGAGCTCCTGTGGTTGCCATGGTAGCACACTTCTTGAAAGACCACTGCTAA

Transcript

BRAKERRLHT00000002691

Protein

Uniprot

Uniprot term	Description
Q27245	Putative aminopeptidase W07G4.4 OS=Caenorhabditis elegans OX=6239 GN=lap-2 PE=3 SV=1
Q0AB75	Probable cytosol aminopeptidase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=pepA PE=3 SV=1
P38019	Probable cytosol aminopeptidase OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=pepA PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00883	Peptidase_M17	Cytosol aminopeptidase family, catalytic domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR011356	Family	Peptidase M17, leucine aminopeptidase/peptidase B	Interproscan
IPR000819	Domain	Peptidase M17, leucyl aminopeptidase, C-terminal	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11963	LEUCINE AMINOPEPTIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008233	Molecular Function	peptidase activity	Interproscan
GO:0019538	Biological Process	protein metabolic process	Interproscan
GO:0030145	Molecular Function	manganese ion binding	Interproscan
GO:0070006	Molecular Function	metalloaminopeptidase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01255	CARP, pepA; leucyl aminopeptidase	EC:3.4.11.1	Peptidases and inhibitors	ko01002	deepkoala