Gene detail

Detailed information of BRAKERRLHP00000009727.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3022636.1, unnamed protein product, partial [Porites evermanni]
Species abbreviation DCRIB · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000009727

ATGGCTGATTCAATGGTCGTACGAGTAGAGGATGACATAAATGACATCGATCCGACGAGTATTTGTCGAAGCGTTTGTGTAACAGGCTTTCAAGCGGGAACAAAATCGGAAGATCTTATTATTCATTTCCAGCGTAAGAAAAATGGCGGCGGGGATATCGAAAGGATCATCGTCAGCAAGAAGGGAACCGCGGTAATAACATTCGATAATCCTGAAGTTGTCTCATCCGTTCTAGAGCATAAACAGAAATTTGAAGGAGTGGTTTTAACAGTGGAACGATATTTGAACACTATGGTCAAGAATGGTCAACAACTGGAGGTATTTGAAGTTGTTTCGGCAGAGCTTTGCTTGGAATTTGTGGAACTTCTCTCCCGCGCACAAACCAAAGTTCTCTTGAAGGAAATCGAGGACAAAACTGGCGTCAAGTGGCTTGAGTCAAGTGAACATTTCATCTTGTCAGGAACATTTAAACAATTGGAAGAGTCTCGTGTCTACCTACAGCAAGGTGTGCATTACTCCAATGGAATAGTTGTTTTCAAcgacctgaaaaaaaaagaagcacCATTAGAGGGACATGAAAGCAAATCGTCTCCGCTTCATGACGAGTCTGAAAACCAGGAAGATGTGAGCCAAGACATACCATCATCGACCGCTGTAAATGAAGCAAATCATCCACATGAAAGAAGCAAGGATGACACACACACTGAACGCAAGGCCTCTTCTGCATCTCCCGAAATTCAGAGTTTTGAGATTGAGCCgaaaattgttaatttttttgtgAAAGCGCATATCAAAGAACTCGAAGACATTGAAATCAAATACCAAGTTGAAATACCCAGAGAGGTTAAAGTAGGTAACTTCAGCCTGAAGCCAAAAAATGCATGCAGTGTTGCTGATTATGAGGAGGCTTGCAACCAATTTATCACTCTGTACCAAAATATGTACCAGCTGGTAAAAATGAAGCGCTTTTCTCTCAAAAgcgagaaaaaaattgtttatgcACGTCAAGTGATTAGTCAAATCGGTAAAAATTTTCCGATTTCAGTAGAAGTATGTAGAGACCGAAAGCACTGGGAGCTGTATGGAGAGGCAAGCTACATAGAAGAGGCCCTTCAATACCTTGAGAAGGAAGGAGTGGAAATAAACatggaaaaagaaaacacgGTGGATGAGAAAGGAAGACGCAAACCatcaaaagatgatgaagaggcTATGGATGTGGATCCCTCTGAGCACTCCAGCAACAAATTGGAGATTTTCTTAGCTGGAAAAGTGAAAGTGTCTGTTTACCGGGGCGATATAACCAGTGAACGAGTTGATGTCATTGTGAATGCCGCTAATGAGAATTTACGACACGATGGGGGTGTGGCCAAGGCCATTCTCGACAAGGGAGGGAAGAAAATCAAGGACGAGTCGCAGGCGATCACACGAAAGCGTGGTGTACTTAAAGATGGAGAAGCAGTCCCCACAAAATCTGGAAACCTGCCTTGTAAAGTGGTTGTTCATGCTGTTGGACCAAGATGGGATGTAATGGGATCCACGAATAGCAGAAAGATTCTGCGTCGCGCCTGTCTCAACAGTTTTATTGAAACTGAAAAACTGAACATGACCTCTATAGCATTTCCAGCTATCGGTTCCGGTATGTATGGAATGCCGAAAGACGTCTGCGCTGAAGTCATGTTTGATGCTGTGGACGAGTTTGTAAGCCAAGGTGgcgcaaaaaagaaaaaaatcactgatATCAGATTCGTCAATATAGATGAAACCTCGGTCCAGGCATTCACGAAAGAGTTTAACAATAGATATGGTGATGCCCGGGAAGGTTCCAGCAGTGAAAAGGCCTCCGGAGTAGGCACCAGCACTTTTTCGCCAACAGGGGGTGAAGGTGGTGGTTCCACCATGCCGACCTCAAGATCAAAACGCGGCAGAGGCCAAATCAGGAACAACCCTCACACAACAAACCCGAATGTTCCAGTTTCAGCTTCTAATGTCGATCATCCTTTGATTTCTGCCGGCCATAATGCATCTTCAAACTCACTTTACAGCAATGCAGTGAAAGGAAATACAGCTGGTCGCGATCCAAAGCCGCCGATAGATCAACAGCCTCAAGGTTATAAATTAAAGGAGGGGTTTTCTCTTCCCCAGAAAGGAGGTGATGGAGTCATGACAGATAAAAAGGAGGAAGTGATATGGAATGATATTCACCACAAAACTAGTCCATATGGAGGTTCTCATGGGTTTGGATATCCCGACCCAGACTACCTGCGGCGAGTTAAAGAAGAGTTGGCTGCAAAAGGAATCCGCTGA

Transcript

BRAKERRLHT00000009727

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WYX8	Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0508 PE=3 SV=1
Q8ZXT3	Uncharacterized protein PAE1111 OS=Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) OX=178306 GN=PAE1111 PE=4 SV=1
Q96XY5	Uncharacterized protein STK_23830 OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_23830 PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000869 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18102 all species →	DTC	Deltex C-terminal domain	Domain	Interproscan
PF01661 all species →	Macro	Macro domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039399 all species →	Homologous_superfamily	Deltex, C-terminal domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR052056 all species →	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR039396 all species →	Domain	Deltex, C-terminal	Interproscan
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453 all species →	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010629 all species →	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212 all species →	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289 all species →	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000009727.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.