Gene detail

Detailed information of BRAKERRLHP00000012594.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3175749.1, unnamed protein product, partial [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000012594

ATGAAACTGCACCTCGCGCGCAACAACATCATGTCTTTCTGCAACGACTCAGATGATAGTGAAGATATTTCCCACACACCCGACAGCGAAACATGGGGCTGTACGTCCCTGACGGTCCTTAATCTATCGCACAATAAACTGCAACATTTACCAAGCGGAATTCAAGGAGCCACTGCATTGAAAAAGCTGTTACTTGACCACAATTTCCTCAAAGATTTTCCCATGCCGTGGAAATGTCCCCTGGAAACCCTCGATCTTTCCCACAACAACTTCACTCATTTTTCCTGTAATATGGAATTGGTGTGGGCGAGTTCTCTAAAGCGCTTTAACCTTTCAAATAACAAACTGGGCTCCATTTCCTGGAGTATCTGCCAACTCACGAGTCTTCAAGACCTGGATATGAGTTACAACGTCTTAAGGCGACTACCAAAGGACGAATATTGGACCGCCACTACTTTACACAAGCTAAACTTCTCCTTCAACAAGCTATGCGCTAAGCCGCTTGTAGATTCACAAGCCGGATCGACGAAGCggtttccatttttcaagaGTTCCAGCCAAGAGGAAGCTCAGGATGTCAAGACTGACTGTGAACTGCCCGTCGCGCTCTTTTCTCCGACGCTGCAAACACTTCTTTTAAACGACAATAACTTGCATGTGGTACCGCTCAGTGTGTGCCGACTGCTGAGCCTTATTGAACTGGATTTAAGCAACAATTTTGAGTTACGAACACTTCCGCCGGAGCTTGGTAATTTGCGCGAGTGCTGGCAACTTCGACTCGGCAAGTTAACCCTTCCTGGGCTTCCTAAACACGTGAGGCCAGGTGAGAACGGTGTTCGACCCAGAGACACACTGGCATACTTACGAGCTACTCTGCGCAAGTCTGTTCCGTATTACCGCATGAAACTGATGGTGGTGGGGCTACAGGGTCGAGGTAAGACCACCTTGCTGGCCGCACTGAAAGGTCAGAAGCTGCCATCCAACTTGTCAACTGTGGGGATTGTGATTGATGAGTGGCAGGTGCAGGTATCATCCTCTTCAAGGTTCACACTACAGCGCTTTTTGGCACAGAGCGACGCACCGGTAATCACATTCAGCACTTGGGATTTAGCAGGACAAAACGTTTATTACGCAGCGCACCAAATGTTCCTGTCGCCCAATACACTCTACCTGGCTGTGTGGAATGTGACACATGGAGAGGAAGGAGTGGAGAGCCTCAGACGCTGGCTCCTAAATATACAGGCTCGCGCACCCTTTTCCGAAGTTCTAATCGTCGGAACGCACCTCGACTTACTTCCGAAGAATAACCGACAAACTCGCGCAGACGCACTCAAGCTCAGCATCGCGAAGAAATATCTGGACAACCAAGGGTTTCCGAGGATTGTGGGTAATATCATGGTTTCTCCGGTTACTGGTGAAAACATCCCTGAGTTGAAAGAGATGATATACAGTAAGGCGCTGAAGGTCAGGGATAACGGAGAGAACATCATTGGGCGACGGGTACCGCAAAGCTACACTGACCTTCAGCAAGTTGTCATCCAGGAAGCTGAGCGTAGGAGATCCACTGGTGAACCGCCGATACTTCTGGAAGATGAAATCTTAAAACTTGCCAAAGACAGCCCAAAAAATGACATCTTGGATACTGAAGAACTGACTTTAGcCACCAGATTCTTACACGAAAATGGCGTCCTACTCCACTACAATGACCAGCTTCGTGGGTTAAACCACCTCTACTTTATCGACCCCACTTGGGTGTGCGATCTCATCGCTACACTTGTCACCATCCGTGAGAGAAATCCTTTCATAATGGACGGCGTCATGAAGATGAAGGATTTAGAGCTGGTTTTGAGAAACCCCAAGTTTCCACAGGAGTTTATTCCACAGTATCTTCAACTGATGGAACGCTTTGAGATCGCTCTGTCGCTGAATGATAAACAGCTCTTAATTCCATCCATGCTGCCCAAGGAGAAACCCGGAATGCAACTCCACCAACTTCAAAAGCTGATCAGAAAAAGATCAAATGAAAAGAGTAAGGCAGCGAATAACCGTGGTCGTACAGCCACTCAACCAGTCGGGAGCAAAGGCGTCACCACGGTGCGCAGAAACTACCAGATGGCCTACACACCGAGCGGCTTCTGGAGTCGGCTAATCACCAGGCTCATAGTTTCCATTCAAAGATGGCGCGCAATTGAACAGATTAAGGAAGAGAGCTATTCATTGGTCTACTGGCGCGAGGGGATTGGGGTCGTTTACGAAGGGGGTTACTTCCAGGTCGAATCATACCAGGAGTTGATTCCTGTAACACAGGGGAAGGCAGTCTTTCATGAAATCAACGGTGTAGCCATTACTGTGTGGTCAGAGCAAGGTGACTTTGCTGCCGTTGGGTTTATTGTCGACCAGATTGATGCTCTGATCTCTGAATGGTATCCAGGCTTAGACGAAACGGACGTGTACGGATTGCCTTTAGTTCGGCGTTTAATTCCCTGTCCACTATGCACGGAGTTAATGACGTCCCATCGCCCCTCAATGAAACGTTCCGTTTCCATGGAGTTTCCCGCCTCTTTTCACGCTTTGCATCCTCCGCGGCCGCACAACTTCACTCTTCCAACATGCGCAGCAACATCACTGAAATTTTCCACAATCGCCTGTCCCTACCACCCTGACAGAGTTGTGTCGCTCCACGATCTTATCCCCGATCTGCTGATGGCGGATTTACCGCGCCATTTCTTGGTTGATCCAAGCCAGTTTAAGTTTGAGGCGCGGGAAACTCAGAAGATCGGCGGCGGGGGCTCGGGCGAGGTGTATCGTGGGGAATACCGAAACGAGGTTGTGGCTGTTAAGACGTTTCACTCCACGAAGTTAACTGGGTTTCCCCATGACAGTGGGCTGGGAGAAACTGGGTCCAGGTCCAGGACTGAAGGAGGCTCTGGCTATCGCAGACCGCATCGAAGCGAGGGGAGTGCGCGCCGATCAGACGTGTTTTCGACGTATTCTGAGGGCGACATGGAGGAGGAACTAGAGAAGACCAAGGTTGTCAAAGCATTCTGGGACTTACGTCAAGAGGTTGCTGTCCTGTGTCGCCTTAACCACCCATGTGTTGTTCGACTTCTCGGCGTCTCCCTGCACCCGTTGTGTTTTGTGTTGGAACTCGCGCCACACGGCAGCTTAGCTTCTGTCATTGATGAGCTTTCTGCAAAGCGCGAAGCACGAATGCAACAACAGGGAAGCAGCGTTTCTAGATCTAGAGAGGCCATTCTAGGGCGTGAGCTGTCATACAAGATCGCATTTCAGGTCGCCAGCGCTATTTGGTATCTTCACGACTGTGACATCATTTACCGGGATCTTAAAGCCGACAATGTGTTGGTGTGGTCCCTGGACGAAAACAGTCTACTTAACGTCAAGCTCTCAGACTACGGCATTTCGTGTTTTGCCACGCCCCAGGGGGTTGCCGGAGAGGAGGGAACGCCTGGGTATCAGGCACCGGAGATTCGGACCGGGGTTGGATATGACGAAAAGGTGGATATTTTCTCCTTCGCAATCTTCGTGTTTGAGCTTCTGTCTGGCTGCCGCCCTTTCCGCGAATATCGCAATGTGGTGGACATAAAGAAGGCGATTCGACGTGGAGTCCGACCGGCTCTTGAATCTTATGATTTAGATACACAGTTACCTAGACTGGAGGGTGTTATGAGATCTTGCTGGCATCACTTACCAGAGAAGCGACCTCATGCAGGTGAAATTTTGCAGCAGATGGAAGAGCCAGCATTTCTTTGCCAGTGTCGACTCGTGCCAGAGAATGACGAAGGACTGTTAGAAAAAGTTACAACCATTCATGGACTCTCACATTCTGGACTTGGAAATCCCTTGGTTTCTTCAGATAATGACGAAAACTTGTCCGAAAATTCTTCAAGCTTCGTTTTGTTATGGGGTCGTGAACGAGACAATCGGAACTACAGCATGATAAACTGTGATACAGGAGTGTTTTATACACACGAACAAAAATGCCCCGGCCACAGGGTACTGTGCATGACAAGAGTTGAAAATCGGACCTGGCTCGGAACTGAGGGATGCACAGTAGAGGTTTTCGGACGCAGGTCTTGGCGTTTGCCCTCGACATTGTGGTCGTATATTACCAAGGCCCCGGTGCTGGCGCTACTGACAGAATATTTTCCCCCTGATTACACTCCTCCAGAGATGTCTCTGTTACAGGATGGAAGCAAGGTTAAACATGTGTACGCGTCCCTTGCCAATGGTACCCTGGTAGTGTTCGCTCAAAAGAGCCCCACCGCGCGTAGGTATTCACACAATGACGTCACACTTGTATCGAAGGAGGAAGACGACATTTTGTCAAGAGAAAGCATCAAGTGGTCCAACATTCAGGTCGTGAACCTAGGTCAGAATGGCATGCCCGCAAAAAGCATGGTCCTTGTACGCGAAAACAAGGAGCTATGGGTCGGATGCGGTAACAAGATCGTCATTGTAGACACGAAAACTATGGTCATCCTGGACGAGATCGCTGTCTACCAAACACAGAGGACCCATGTGCGAATCATGGTCACGGATGGTGCGCGTGTATGGAGCGCCGACAGAAGATCAACGAAAATTATACAATGGGAAGTCGGTAGTCGTCAGCTCACTCATATTTTCGACTGCGATGTTGATAGCGCGGTGGGAGAGGTATTGTCCACCGAAGTAACGGAGCCACGTCGCAAGGATAGCAAAGGAAGCATTGACCGGACGCGATACAGAGCGATAAGTGACCCACCAGGAAGTCTAGACCAGCCGTCATACACGGAAGCCATGTTCAAAGAAGCCATGACCAGCGGAAGAAACAAAGAAGGCAACAAAGCAGATTCCATGCGCAGAGATAATTCCCTTCCGCGAGACACCACAAGCGTTGTTCTTGAGAACTCTGATAACGAAGATTTGGAAAGTTCCGTCGGAACTGTCTCGCCCCCCATGTCTATTCCCGGATCGCAGGCAAAGTTCTTCAGCGAACAAACGTCGGGAAAGGATTTACCCAGACGTTCTCGATCCCTCTCATCCGAAACCACTGATAGTGGAATTTCTTCATTTCGCAACACCAGCACAGTGAAAAACAACACTGCAGACACAAACACGAATACTTCGGGTGCTGCTCGGGCTCGTGCCGAAGATTCACGAGATGGCAAGGTTCCTACTTCGGAGACTactgaaaacatttttagtGAAGCAGAAGAAAAGGCACCTCTTGACGGAACTCAAAATGTTTCGGAGCAAAAGTTGGATTCAAGTGGAGGGTTTACTGCCGAGAATCAGTCCAAAGAAGAACCGTCAGAGATTGTACCTGTTGTTATAAAACAGGATAGAAGTGACACCGCGGATATTGAGAGCGGCTCCGCAAAGAGCGAGCATGACACCCAACCAGCTAAAGACGAATCTGTGATCACAGGTGATGTCAAAGAACGTGATGCTGATACGGACCAGGATGAAAATGAAACGAAATTTGAGCTCGTGGACCGCGAAGAAACACGACAAGCCTTCGTGGAGGGCACGAAGAAAACCTCTCGCTCTGATGATGCGAGTTCTCAACATTGTGCCTCAATGGCCACTTTGCAAAAGCGTTTCACCTGGTCTTCTCGCACACCGTCGCTAATGAGTTCACAGAAACGAAGATCGCAGCGCTGGCAGACATCCGaggacagcaacagcaacaacaacaacaaatcgcCTCCCCCCTCCAAACCCTGGGTCGGGAGACCGCGTTTGCGCATACTTGCGGGCTCAATAAACCGAGTGACAGCACTTCTGTTGGTGAATGGCACTCTTTGGATTGGGCGTGGCGTAGGCGATGTACTCACAGTCAACGTAAATTCAGCCAATAACGATCTGCCTATCGGTCACGTGTTTGCTCAACTCGAGAGCGACAATCTTCTAGGTTACGAAAACGGGCAAGTAGACGAGATTGTAACCAGCGGCATGAACAAAGTTGTGTGCCTTCGTCGGCTGGAGCCTATGCGCGGGAGTGCGACGAACGAGGATAGATGCAcggaacgttaccagttgactGTGTGGGAAGCCTGGGGCGACACGGAGTTTAGAAAGTTCAAAGATCGCTTAGATGATTTTAACTCACTGGTTGAGTAA

Transcript

BRAKERRLHT00000012594

Protein

BRAKERRLHP00000012594.1

MKLHLARNNIMSFCNDSDDSEDISHTPDSETWGCTSLTVLNLSHNKLQHLPSGIQGATALKKLLLDHNFLKDFPMPWKCPLETLDLSHNNFTHFSCNMELVWASSLKRFNLSNNKLGSISWSICQLTSLQDLDMSYNVLRRLPKDEYWTATTLHKLNFSFNKLCAKPLVDSQAGSTKRFPFFKSSSQEEAQDVKTDCELPVALFSPTLQTLLLNDNNLHVVPLSVCRLLSLIELDLSNNFELRTLPPELGNLRECWQLRLGKLTLPGLPKHVRPGENGVRPRDTLAYLRATLRKSVPYYRMKLMVVGLQGRGKTTLLAALKGQKLPSNLSTVGIVIDEWQVQVSSSSRFTLQRFLAQSDAPVITFSTWDLAGQNVYYAAHQMFLSPNTLYLAVWNVTHGEEGVESLRRWLLNIQARAPFSEVLIVGTHLDLLPKNNRQTRADALKLSIAKKYLDNQGFPRIVGNIMVSPVTGENIPELKEMIYSKALKVRDNGENIIGRRVPQSYTDLQQVVIQEAERRRSTGEPPILLEDEILKLAKDSPKNDILDTEELTLATRFLHENGVLLHYNDQLRGLNHLYFIDPTWVCDLIATLVTIRERNPFIMDGVMKMKDLELVLRNPKFPQEFIPQYLQLMERFEIALSLNDKQLLIPSMLPKEKPGMQLHQLQKLIRKRSNEKSKAANNRGRTATQPVGSKGVTTVRRNYQMAYTPSGFWSRLITRLIVSIQRWRAIEQIKEESYSLVYWREGIGVVYEGGYFQVESYQELIPVTQGKAVFHEINGVAITVWSEQGDFAAVGFIVDQIDALISEWYPGLDETDVYGLPLVRRLIPCPLCTELMTSHRPSMKRSVSMEFPASFHALHPPRPHNFTLPTCAATSLKFSTIACPYHPDRVVSLHDLIPDLLMADLPRHFLVDPSQFKFEARETQKIGGGGSGEVYRGEYRNEVVAVKTFHSTKLTGFPHDSGLGETGSRSRTEGGSGYRRPHRSEGSARRSDVFSTYSEGDMEEELEKTKVVKAFWDLRQEVAVLCRLNHPCVVRLLGVSLHPLCFVLELAPHGSLASVIDELSAKREARMQQQGSSVSRSREAILGRELSYKIAFQVASAIWYLHDCDIIYRDLKADNVLVWSLDENSLLNVKLSDYGISCFATPQGVAGEEGTPGYQAPEIRTGVGYDEKVDIFSFAIFVFELLSGCRPFREYRNVVDIKKAIRRGVRPALESYDLDTQLPRLEGVMRSCWHHLPEKRPHAGEILQQMEEPAFLCQCRLVPENDEGLLEKVTTIHGLSHSGLGNPLVSSDNDENLSENSSSFVLLWGRERDNRNYSMINCDTGVFYTHEQKCPGHRVLCMTRVENRTWLGTEGCTVEVFGRRSWRLPSTLWSYITKAPVLALLTEYFPPDYTPPEMSLLQDGSKVKHVYASLANGTLVVFAQKSPTARRYSHNDVTLVSKEEDDILSRESIKWSNIQVVNLGQNGMPAKSMVLVRENKELWVGCGNKIVIVDTKTMVILDEIAVYQTQRTHVRIMVTDGARVWSADRRSTKIIQWEVGSRQLTHIFDCDVDSAVGEVLSTEVTEPRRKDSKGSIDRTRYRAISDPPGSLDQPSYTEAMFKEAMTSGRNKEGNKADSMRRDNSLPRDTTSVVLENSDNEDLESSVGTVSPPMSIPGSQAKFFSEQTSGKDLPRRSRSLSSETTDSGISSFRNTSTVKNNTADTNTNTSGAARARAEDSRDGKVPTSETTENIFSEAEEKAPLDGTQNVSEQKLDSSGGFTAENQSKEEPSEIVPVVIKQDRSDTADIESGSAKSEHDTQPAKDESVITGDVKERDADTDQDENETKFELVDREETRQAFVEGTKKTSRSDDASSQHCASMATLQKRFTWSSRTPSLMSSQKRRSQRWQTSEDSNSNNNNKSPPPSKPWVGRPRLRILAGSINRVTALLLVNGTLWIGRGVGDVLTVNVNSANNDLPIGHVFAQLESDNLLGYENGQVDEIVTSGMNKVVCLRRLEPMRGSATNEDRCTERYQLTVWEAWGDTEFRKFKDRLDDFNSLVE

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UHC2	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Mus musculus OX=10090 GN=Lrrk1 PE=1 SV=1
Q38SD2	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Homo sapiens OX=9606 GN=LRRK1 PE=1 SV=3
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003012 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19056 all species →	WD40_2	WD40 repeated domain	Repeat	Interproscan
PF00560 all species →	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020859 all species →	Domain	Roc domain	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR050647 all species →	Family	Plant LRR receptor-like serine/threonine-protein kinases	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48056 all species →	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08843	LRRK1; leucine-rich repeat kinase 1	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.