Gene detail

Detailed information of BRAKERRLHP00000012605.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: KAJ7360251.1, hypothetical protein OS493_016880 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000012605

ATGATAGCAGATGGGACGTTTATACAATTCCACAAACTCCACAGAATACGTTTGCAAGACAACCTGTTGAGATCGGTGCCAGATTTAACTGGCCTTAAAACTCTTCAAGAACTGTCATTGGATCACAATCAGATTACCCATCTACCAAAGAATGTGTTTCAGAATATTTCTGTAATAGGAAATCTGGGTTTATCCTTCAACAAACTACTGTCGGTACCAGACAACACGTTTATTGGATTCGAGAGATTATTGCTGTTaATGATGATAAAAAATAATCTGACGTATATTCCTAAAGAGGCTTTCGCAGGTCTTCATCTACAATCGTTGTTTCTCCACAGCAATGCAATCGAACATATTGACTACAAAGCTTTTGACAGGCTCCATGATCTTAAATCAttaacccTTTTTGACAATCCGTTAACATCATTACCAGATGGGATATTTAATAATATGACATCCAATACAAAGGTATATATAACGTGCAAAAACCTACAACAACTCCCTCTTGGGAGATACACCTCAGTCATAGAATGTGCTCCTTCAGCAACATTTCGTGTCCTTCTAGACGAAGACGAAACTTTCTCCATAAGCGCCTTCACAAATACTGGATTTGTGTGCCGACCGTGTATACCTGGATATGTGCCTGGATATATGCTATGTTTTAACTGTAGCCTTTGCAGAGCTGGTTTCTATAACGACGATGGGTCTTGCTTGTCATGCCCCGCAGGAGGTTTCTACCAGGACCAAATGGGGCAGGTTCACTGCAAGAAGTGTAGTGTTGGTACTTACGTCTCCGTGGAGCGTCACCCTGCGACACGTGCAACTGACTGCTGGGCATGCCCATACGGTACTCTTTCGAATGAGACCGCTGGCTATCGTGCATGCAGATGCCTTCGTGGATTTTACCGCGTGGATCGTTTTGGTCCCTGTTCAGAATGTCCAGCGCATAGTATAAACTGCGTCAATGATACAGCAACACTGGCGTCTAATTACTACTGGAAGTGGAGCAACCAAAGTAATAACGAGTTCTATAAGAAGTTTGTGAGCAACCTCCACTGTTTTGGTCCGTGTTACAACGATATGTACTCCAAGTTTACCATTCCACTACCGAAACCAGTTAAATGTCCTTATGCTGGCTCCTGCAAGGGTGGAATCGACTCAGAATGTTACGAAGGATATCAAGGAAACTTATGTGCTACCTGTACGAATGGCTACTATCTACGTTTTAACTCCTGCTTGAAATGTCCGCGGTTAACTGTTTCTATAATTTCATCCGTTCTGGTTGTTGCGTTGTTTGTTGTGGTATTTCTAGTGGTTGTGTGGGGCGATTCCAAACGCACAGAGAATAATCGTACTGTCGCAGATGTTATCATGTcttgttttaaaattgtaaTTGGATTTTATCAAGTCATTGCTGGTATTTTCTCGGCTTTGACGAGAGTTCAGTGGCCAGTAGCATTGATCTCTATGGAAAAGTATTTGAAATTGTTCGAGGGAAATGTCTTTCAATTTGCTCCATTGAGTTGCATTCACCCTCTCTTGCGACTGGACCAGTTCATGAGATTCGTGCTAGTTCTTTCCGCTAATGTCGCAGTTGTTTCTCTTCTTCTCTTTTATCTCTTTATTAAAAAGCGCTATATCAACAGGAAGATGGATTGTCCGGACAGCGAAAAACTACTAGCAGTTTCTTGTTTGAAGAAGTCCTGCTGTCGAAACATATTCTTGTTCCTTCTGGCTACATATCCAATAACAAGTAAAACGATTATCCAAATCCTGCCTCTACCAGGCGCGTGTGTCACACAGTGCTTCACAGATGACAAGAGTCAATGTATCTCCCTCCTGAGGGCTGATTATTCCAATCAATGTTTCACTGCCCGTCACAAGTTGTTTTGGCCCTTTGCTGCTGTGTTTTTTTTGTATCCTGTAGGATTTCCTCTGCTGGTGCTGCTTCTCATTTACAAATACCGTGAATCACAAGCTAATGAAGAACTTGCTTTCGGGCTAAAAGTCTTTTTTGAAAACTATAAGAAAACATTCTGGTTTTGGGAGATAATAGAAATGTATCGTAAACTGATACTTATCtcattcatttttctttttgattccGAGAGCTTTTCCCAGATTAGCCTTACCGTGCTCACTGTGGGCGTATTTGGAGTTGCCTACACCTGTTTCCGCCCGATAAAAGGCAAGTTTGAAGATCGACTGCAAACTTTCGTGTTGTGGGTCATTTTTTTTGACGTGTGCCTTGGAGTAATGTACATCAACTGTGACGTCAATCAAGATCATAAAGGAAACGATTCCTTACTTGTTAACATCCTCTTCGTTGCCCTGAATAGCTTGGTGTTACTGGTTGCTTTGGGTAAAGGAATTGTCCATGTCAAATTCTTCTGGGAGACGGTTTCTTCATGTCTGATGCAATGCTTCCATTTTGTGGGAAACGGGATTATTGTTGTCAAGAGAAAGATTGCCAGCTGTTTTCAGAGTTTTACCTTCTTCACACCAAGAACTCAGCCATTCGAACAACAGCCATTTCTTATCCATGAGATCACTTGA

Transcript

BRAKERRLHT00000012605

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR050328	Family	Multifunctional Developmental and Immune Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24373	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04591	ADGRE1, EMR1; adhesion G protein-coupled receptor E1	-	G protein-coupled receptors	ko04030	deepkoala