Gene detail

Detailed information of BRAKERRLHP00000016202.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3017125.1, unnamed protein product [Porites evermanni]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000016202

ATGGCCAACAGTCGCCTTCATTTTGACGATGGTGTTTTGTATTTAAATTTGAGCGGCGGGGACCAGTGCCATCACGTGAAGAAGAAGCGGGAAACCATCATTTCCTTTGTGTGCCATTCAGATTACGGCAAAGTGGATTATGGAAAGCCTGTGTTTATTTCTGAGAATGATTGTACATATTATATAATGTGGCACACTTCACTGGTTTGCGAAAGGCAGTATGAATGTGCAGCTTTTACGAAAATCGGTGATAGTACAGTCACGTACAGTCTTGGAAGACTCATGAGATCGGACGCTAACTGGCTGGTCACCAACGAGGGAGGCGTTAAGGACTCTCACAGCTATTACGTGAATTTGTGTCGTCCTCTGGTGCCTATGCCAGGCAAGAACTGTCCGGCGGGAGCATGGGCTTGTGGTATTGGAGACGGTAATCCTCTGGACTTGGGCTATGCAACTAAGCCTCCTACAGCTAGCGAAGGAGAGGTGCAGCTTGTGTACACCGGCAGGACTAAATGTGACGTGAACGATCCTTCGAAAGTCTGGACGGTCCATTTCACGTTTATTTGTACTTATGGCACTTTGGGCCATCCTGTTTTGGAGACAAACGAGAACTGCATCGTCCGTATTCGATGGTTAACTTCAGCTGCATGCGGAGATAAGCAGAAAGCAGAGCTTGACAAATGCAGAGTTTATGACGATAGCACTGGAGAATACTATGACCTGAAACCTTTGTCAAGGCCCGATCAGGATCATAGTTATTTCAAAGTGAGCCAGAATGAATCTCGcgttttctttgtttctgtgTGTCACGGTTTGAAGTTGAACAAAGCTGACAACTGCACTAAAGAAGGTGGAGCTGGTGTGTGCTTAATGACAAAAAAAGGAGATAATACGTTGTACAAGGCCTTGGGTCTTTTCAAGTTTAGAGACATGACTTACTACAAAGATGAAGGAATGCTGATCCTGAAATACTGTAGCCGTGAATGTAACAGTAAAGAATCCGATCTTATTATATCAAGAATAATATTTGTGTGCGACAAGAGCCAATCCTCTGTTGGAAAACCAGAACTAGACACTATTGGGAATTATGGTGCAGATTTTACCTGGAGAACACATCTGGTTTGTCCTCCGGCGGAAGAAGAATGCAGCTACAGTGCTGGTGACAAGAGTTACGATTTACGACTTTTAACAAGTCGAACGCGAAGCTGGTATTATGAACATAACAAAGACAGATTCTGGATAAACATATGCAGAGGCATACGTGATGGACCAAAAGGTTGTCCATCAACAGCTTCAGTGTGTATGATCAGGAAAGGGAGTGACAAAGTGAACGTAGTTGGCGTCACGTCTACTCAGCGAATGAGTGTAAACGATGGTAAACTTCAACTGAGATATTCTGGCCTACCCCCAGTTGTAGGATGCCGTCCAGAGAAGAATTCCAAAGTAGTGTTCTATTTTGAGTGCGGAAATGACATTGGACAACCACTGTTTCAAAGGGAAGAGTGGTCATCTTGTTCATTTATTATCAACTGGAAAAGTTCAGTGGCTTGCCAAATATCAAGGGAGAAACTTGACGAAAACCACTGTGTTGTCAAACATCCTGTGACAGGCGCGCAAATCGATTTTAATCAACTTGTTGGCAGTACTGGAAGAACTTGGACCATCTATGGCGTAAGCGAGAACAACAAGCAAGTGCCGTATTCCATTAACATTTGTGGTGAACTCAGTACAGATTTATCATCAGACTGTGGAGGTCGGGATGCGATCTGTTTTAATAACGAATGCTATGATATGGCAACCAAGACTTTTTATTATGAAGGCTCGATATTTTCGCTTGAGAtgagaacaaagaaaacatgtGAAAGCGGTAAAACGGATCCATTTGTCTTGGTGATTAACTTCCAGTGTTCAGTGGGCGCAGGAGTGGGAAGTCCAAAGTTTGATTATGTGTCCATTAACTGCCATCACGTTTTCTCGTGGCCAACATCCATTGTGTGCTCAGGCGACTTGAGTCAAGATGTGACAGACATCCCTGCTGTACATAAAGCGCACAAGTCTTCTGCAAAGACGAATGTGGGAATCGCATTCGGCGTCATATTTGCCGTTATTTTGATTGTGGTGTTTGCAGTTGTTCTTCATAAACCATCCAGAAGGTAA

Transcript

BRAKERRLHT00000016202

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08169	Cation-independent mannose-6-phosphate receptor OS=Bos taurus OX=9913 GN=IGF2R PE=1 SV=2
P11717	Cation-independent mannose-6-phosphate receptor OS=Homo sapiens OX=9606 GN=IGF2R PE=1 SV=3
Q07113	Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002799 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00878 all species →	CIMR	Cation-independent mannose-6-phosphate receptor repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044865 all species →	Domain	MRH domain	Interproscan
IPR009011 all species →	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR000479 all species →	Repeat	Cation-independent mannose-6-phosphate receptor repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15071 all species →	MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005520 all species →	Molecular Function	insulin-like growth factor binding	Interproscan
GO:0005770 all species →	Cellular Component	late endosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007041 all species →	Biological Process	lysosomal transport	Interproscan
GO:0005537 all species →	Molecular Function	D-mannose binding	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000016202.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.