Gene detail

Detailed information of BRAKERRLHP00000017469.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3019770.1, unnamed protein product [Porites evermanni]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000017469

ATGTGCCATTTCCTTGCTTGTATTCGCCTTAATTTCCATCAGGAATTCGTGAAGCGCTACAGCTTGTTGTTCCCGAGAATTGAGAATGGAGATCTGCGAGATGATATGCCGAGCATTCTGGAATCCTTGGGGTTGGATCTACGGGAATATCAGATGGGCAAACAAAAGATCTTTCTCCGAGACAGTCAGCATTCTCTTTTACAAACCCGTCTTCACTCGGAGCAGATCCACAAGATCTGTGTTTTACAGCGCTGGATCAAGGGAGTTCTACAGAGGAGACAGTTTCTCAGGCAACGAACTGCTGCCGTTGTGATTCAGGCCGCGTGGCGCGGTTACCTGGCCCGCGCTGAACTTGAGCTGCAAGGACTGGCAGTACTTCGAATCCAGTCCTCCTGGCGCATGTTCGTTGCTCGGCGTTACTATCTAGACGTGCGTTACAGAATTGTTGTGTTACAGAGTCACGCTAGAGGATACTTGGCAAGAAGAAGTCGACAGAAACTTTCTCCATTGCGGTCACTTAGTCGATCATTAAGTGATCCTTCGAGGTACAAAGTACCACTTCATTCAGAAGACGGCGTTACTTCTGAAGACTATCTAGACGAAAACGAGGAAGTGTCGGACAGGGCTAAAAACGGAGAAGAATATGAGGACCCTTGGATGCCAAGAGAAAGAGCTCCCTCCAAGGTTAAAGAAATTTCCAAAATGCTAGAGGATAAACTACCGCAAAATGAATCGAGGGACAAGGTTGTCCGCCAGAGGTCATCCTCAGTGCCCAACAGTCCAGAAACCAAGCGACACAATCGGCCTCCTCCAATCGAACTTACGCCAACCAAACCGCCCCGGAGAAACGCCTTCAGTGAACTGAGCCCTATACCTTCTCCCACGACACCCACCACAAAGTCAGCCGAGGATCTTCCGAGCGAACTCAAACCCCCTAATTTTTCCCGAAAGCTCACGAGCAGCATTCGAAGGCGCCTGTCACCTAAAGGCAAACCTGGTCAGCGGTATAGCGCTTCAGACGTTCTGGACGATCGATCGTCAGTTGTTGATGACATGCATTTGTTGAGGACTGGGGTGAAGTCGAATTTCCCCAACAGTTTACACCGCGCTGAGTATGGCGGCAAAGTGAAGAAAGGATTCCTGCGTAAAATTGCGCGCAACAACTCTCTAAGAAGACGGTCTGATACTAATTTAAACAAAAGTGCGGCAAAGAAATCATCCACCGAGTTGCCTTTAGGAAGTGCTTCGCATGAAGACCTGACAAAGGCGCTGAAGCAGACGAAGATAGTCAGCTGTAATGTCACACCAGGTCCTGTGCAGTGGAAAAATACGGGCAAAAAGTTCGTAAAGGGGAACGAGGAACTGGGTGAACTGGAGGTGTTTCTGATGAATAAGgTCTCCATCTTGAACAAAGAGGAGAACAAGCGGGACACTATTGTAGACCGTGTGTTTAGAAAGGCTCTACAAGAATTCCACATGCAGCTTATTGCATCATATTCTGTTCTTATGAAGGAAGACAAGTCGTTTACCCTAAAGTACGAAGATTTGATGGGTCAGTTTGAGTTCACACTGAATAAAATCATCAAAAGTGAGCggattacggacagtttccctGTCATTATGGGTGTAAACGCGTTTGCTGGAGTAATCTCCGAGTTTATCACCTCAAGAACACTCACGCAGCCCAAACCGGCGAAGaACTTTAATGGCCACCAGTTCTCTACCACTCAGTTCAGTATCCCAACATTCTGTGAGCACTGTGGAGGGTTCATTTGGGGACTCGACAAAGGATTCGTTTGCCAAGAATGCAGATTTACTTGCCACAAGAAGTGTCACGCAAAGTCACAGAACATTTGCCGAAAGGGAAAAAACAATTCCAAGGGAAAAacGGAACTATTTGGAGGTGATATATCCTGTCTTGTGTCAAATGAAAACACCGTTCCACCATTAGTTGACAAACTCATCAAAGACATTGAAAAAAGAGGTTTATACACAGAGGGCCTTTACAGAAAATCTCCCAGCAGTGTTGCGGTTAAAAAGCTAAAGAATGACATTTGTACATTAGGGATTGACAATGTGAATTTAGAGGAGTTTACAGTGCACGTGGTTGCGGGAGTCTTAAAATTGTTCTTCAGACAATTGTCGGTTCCCATCATCGCTGCGGATTTCTACATGGATTTTATACGAACTGCGGacCTAAGTGAAGAAAAGTTACGACTGCACGCCCTCTACGGTTTGGTAGAAAAACTACCTGGAGCGAGTAGAGACACCTTGGAAAGACTCGTGTTTCATCTGGCAAGAATATCTCAACATCAAGAGGAAAACTTGATGAACGCGAATGCGCTATCGATAATCTGGGCCCAGTGCATCATGGCGACACCCCCCGAAATGAGTGCGCTGGAGAGCATGCAAGATGTGGCTAAACAAACCAAATGTCTCGAAACCCTCATTCTCGGCCAGCTGTCCAAGATCCGAACAACTATAAACAAACTCCGTGGACTTGACATAGCAACAGATACAGCTAATAAGCGCTTGTCCATGTTGAACCTCAACGAAGAAGATGAAGGTTTAGTCGAAAATTGCTTAGAAGGCGAAGCACCGGAAAAAATGCTTCTTACACAACAACTATACGAACTACGAGAACAAAGAGCTTTTTTGACAGCCAAACTGACCAGCTTAGGGCCTGGAGTCCCCAGGGGAACGGATAGTGAAGAGGACTTGGCAAGCGACGGTTTTCAAACTGATGACGATTTGGACGCAGGTGAAGAAGAGGAACGAAGGGAGGAGTACGCCATCACGTTTGACCTCCCCGCTACCCCTGTTCAATTACAGCATTTGACCAAGAATCGCGTCAGACAACCAGCAGTGAAAAGGCGCCGGCCGACTAGAGCCAAGTTACGCGAGCAAGTAGAACAGAGATAG

Transcript

BRAKERRLHT00000017469

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7EZG2	Unconventional myosin-IXAa OS=Danio rerio OX=7955 GN=myo9aa PE=3 SV=1
E7F3F0	Unconventional myosin-IXAb OS=Danio rerio OX=7955 GN=myo9ab PE=3 SV=3
Q13459	Unconventional myosin-IXb OS=Homo sapiens OX=9606 GN=MYO9B PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002346 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020454 all species →	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR046987 all species →	Family	Unconventional class IX myosin	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46184 all species →	UNCONVENTIONAL MYOSIN-IXB-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0000146 all species →	Molecular Function	microfilament motor activity	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000017469.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.