Gene detail

Detailed information of BRAKERRLHP00000018874.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3169046.1, unnamed protein product [Porites evermanni]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XJD3	Pre-mRNA 3'-end-processing factor FIP1 OS=Danio rerio OX=7955 GN=fip1l1 PE=1 SV=1
Q5U317	Pre-mRNA 3'-end-processing factor FIP1 OS=Rattus norvegicus OX=10116 GN=Fip1l1 PE=1 SV=1
Q5RAA7	Pre-mRNA 3'-end-processing factor FIP1 OS=Pongo abelii OX=9601 GN=FIP1L1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004847 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05182 all species →	Fip1	Fip1 motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051187 all species →	Family	Pre-mRNA 3'-end-processing regulator	Interproscan
IPR007854 all species →	Domain	Pre-mRNA polyadenylation factor Fip1 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13484 all species →	FIP1-LIKE 1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005847 all species →	Cellular Component	mRNA cleavage and polyadenylation specificity factor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14405	FIP1L1, FIP1; pre-mRNA 3'-end-processing factor FIP1	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.