Gene detail

Detailed information of BRAKERRLHP00000019025.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3019695.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000019025

ATGGATGGAAGCCGGATTTACGTTCGAGTTACCGGAAAACCAATTTCAAAGAAAGAattagaaatatattttcaatCTCGCAAACAGTCTGGCGGTGGAGACATCAGCTCGATAGAGCAGATTAACGATGAGGAGTTCATCATTACATTTGAAGACCAGGAGGTTGCAAGAAATGTAACACTCAGAACGCATGCTCTTAACGGAGAACGAGTTGAGGTGTCATGTCGTCCGTTCAATGGGGAGAATACACCATCAAATCAGCATGGTGTTGTGATCATCCGTGGACTTTCCAAAGATACAACGGAAGACGCTCTTCTGAACTATTTAGAGAACACGAGGCGTTCAGGTGGCGGGCAAGTGGAAGAAGTGAAAATCAATGGAAATTCGGCACGAGTAAAGTTTGAGTCATCAGAAGTGGCAAACCATGTGGTCCAACGTGACAAGCATACCTTAAATGGTGCTTCACTTGATGTCACTTTAGAGATGTCTGATAATTGCAAGGAAGGTGGAAAAACTATCATGGTTACTGGCCTTGCAGCAAAGACCACTAAAGACTCCATTTTGAACTACTTTGAAAATAAACGACGATCCGGTGGTGGAGAGGTGGAAAATGTGGAGTTTCAACGTGACAAGGGTGTGGCTTTCGTGACATTTGAAGATACAAATGCTGTTACCACTGTGCTACAACGTGACCAGCATTCCTTAGACGGAGCCGTCCTAACCGTTGCATCGAGTGACACGGCAGTTGCGTTgcaagaaaacgaagaaatcCAAGAATCACGAGCCATTGAAGTAACTGGACTTGCCTCAACTACAACCAAAGATtccattataaactattttgaAAACACTCGGCGCTCAGGAGGAGGGGAAATAGAAAACGTGGAGTTCACGCCCGAAAAGGGATGTGCTGTCGTGACTTTTCTATCGGCTGAAAGTGCACGAGGGGCTGTAAACAAAGGAAATCTCACCCTTGATAAATCAGAATTAAAAGTTACACTACAAAAGCCTGTCAAGAAACTTCCCATTGATACTATGAGGCTCCTTGTGAAAGGTTTGAATGAACTTACTACACGGGACGCACTGATTTCTTACATGGAAGTAGTCAGTGGATTGGAAGTATCAGATATAGAATTTGGAGAGCAGGGCTGTGCAATGGTGATTTTCAGTGAAACATACGACTACGAGATCATTGCAAAAAAGGTTGCAAAGAGGAAACTGGATGACAAAATGCTGTCGGTAGAGAAGGTTCCTGTTTGTCTTTGTGTCCAAGTCACGGGTTTGAACAGGGACAACACCACAGAGGATGCTGTCCTGTACTACTTTGAAAATCCCAAGAATGGTGGCGGTGATGTTAACAACGTTGAACTCAACATAAAAGAAGGCTGGGCACTGGTGTACTTCGAAGATCCACTagTTGTTGCTAAAGTTTTGGAAAAGAGTCACACCCTCAATGAAGCACCGTTAAAAGTTAGACTTCACAACCAACTCGTTTCTATGCCAGTCTCTCCGCCCGATGAACATGGTCTGGAGAAACAAATATCCGTAGAAGCTCAACTAATGCTTTTTATTATTGAGCGACGTCAAGTTGATCTAACACATCTGCAGGATAAACATCGTGTGAAGATAAGTTGGGATAAAGGCTGCAATCATATCACTCTTACGCCTTTCCCTGAAAAATCAACAGACATAGATCAATTGGAAGACGCGTCCAAGGCAATTGCTTCCTTTATTGATGGATTTGAGACAAGCACGTTTCAGATCACGCCAGATGCTTGGAATTCTGTTGTGGaaacatttgaagaaaaaatcacttgcATGAAAGACAAAGTAAAAATTCAGCTCTTGAATCAGTATTATAAAATTGTCTTAACAGGGATGAAGCAAGAAATGGAAGGCTTAGTTAAAGAACTAGACGAATTGAAGACAGAAATTGAAAAACGACTAGCACTTGAGGCATCTAAAGCAACAACCACTGTCAGTAATATCCCGTTAAAGGGCCTGAAGTTTTTGAATGATCTTGACTTTGACAAGGAACTCCAAGTCAAATACGATGACACACAAGTAGACATTATTCTCGACAAAGGTCAGGTGCATATTTGTGGTCCTTCAAAAAACATTCATAAAGCAACTGCAGATATATGGCAAGCCGTTGCAAACATGAAGGACGTACGTCTTGAAATCTCCCAGAATGCTACCGGGGTACTTAGAAGCGCAGCTTGTCAGTCATTTATTAAAGAGCAATTAACAGCCAACAATTTACAAGCTCTCCTAACCTTTGATCTTAAAGAGGAAGACGAAGACGAGTTCTCAGTTACAGCAATCGTCATGGGAATGAACTCTGACGTTGCTCACAAAgcttcaattttagtgaaaacgATCATTAGTGAAGAAAGCATTCTTTTAGAAGAGGGTCAGGTCCAGCTCGAGAAAAGTGAGAAATGGCGCCTGTTTAGAAATGAACTCACCGCTAATTCTATTTTAAGTATCAAATTCGATCGAAACACCAAGAAATTGTGCCTAGCGGGGAGAAAGGAGGATGTTACTTCTGCACTGAGAAGTGTCAAACGCTTCTTGAAAGAAAATACTATTGTCAGCGAAGTTGTGGAACTAACGACGGGCTGCCGAAGGTTTCTGGCAAAGTACCGAGAAAACGATCTTCGCCAAATACAAGAAGAATTGAACAAGCACTCTACGCTTATTAAGGGGACAGGAGGTGACGATGACGAGGACGTCGTCGTCACTGGTACGACCGATGGGGTTGCCAAAGGCACGAAGATGATCCAAGATTTAGCCTCCACCGTTGAAAGCCAGAAGGTTCCTCTTGACAAACCAGGAATGCGAAAAGCACTTAATCGAAGCAAGGGGAAGAAAATACTGGCTCTACTAGAAAACGAAAACAAGTGTGTAATCGAGTACGTTAATGCCGAGAAAGATGCTTCCTTACTGAGCTTGACTGAAGATGCAAAAGGAGAtacaaagaaaataaagaaagagTGCGAGTGTAGTTTCCTGACTCCAGAAGGTAAAACGATCAAGGTGTTTAAAGACAACATCTGCGATCGTAACGTAGACGTTATTGTCAACGCAGCCAGCGCTAAACTCCAGCATTCGAGTGGTGTCTCCAAAGCCATAGTTGATGCCGGGGGAGAAAGTATCCAGGACGAGTGCGATAAATTAATTATCGAACATGGATCTATTTTGGAAGGACAAGTTGTCGTTACATCCGCTGGAAAGATGCCCTTCAAGAAGATCGTCCATGCCGTGGGTCCACTTTGGAGAAAGGAAGCAACACGAGAAAAGTCAATGGGCAAAACTCCAAGAGAGGAGAAGCTCCTTCGCTATGCAGTGTCAAATGCCTTGCACGCAGCAAGAACCTTTACTTCCATAGCACTACCTGCCATTAGCACGGGTGCTTCTGAATTTCCACGTGATTTGTGCGCTAATATTATGGTTGATGTCACCCTAGAGTTTTGTGAAGAAAATCCATCCTGCAGTTTGTCTGAGATTCAGTTCACCAGCATTGATGATGCAGTTGTTAACGCTTTTGTTACTGAGATGACTGCCAGATTTGGGCAAGATCCCAATTTTCTAGATGCTTCAAAACGAAACGTCGCATCAAGAGCAACGGGCAAAGGAAAAGGCAAGGGTAGAAAAAAGACAGCCCCTACATCGTCACCTGTATCGGATACACCAGATGGGCCAAATGATATCACGACACCGGAAGGTTTAAAAGTAGTTCTTGTGATTGGCGATATGACTCGTGAACAGGCAAGTTACACCCTATTTCGtacaaaagaaatcacaaatcAGACCAGTACTGCTCACTGA

Transcript

BRAKERRLHT00000019025

Protein

Uniprot

Uniprot term	Description
Q9WYX8	Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0508 PE=3 SV=1
Q0T5Z6	O-acetyl-ADP-ribose deacetylase OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=ymdB PE=3 SV=1
P0A8D8	O-acetyl-ADP-ribose deacetylase OS=Escherichia coli O157:H7 OX=83334 GN=ymdB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01661	Macro	Macro domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043472	Homologous_superfamily	Macro domain-like	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR002589	Domain	Macro domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR052056	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan
IPR034464	Domain	PARP-10, RNA recognition motif 1 and 2	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010629	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan