Gene detail

Detailed information of BRAKERRLHP00000021412.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3112888.1, unnamed protein product [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000021412

ATGCCGTCTGGAGATGCAAGGAAGGACTTTGTCGTCGCCACCACTGGTAATTATTTTGGAATTCAGAGTTCTGACAGTGTTTTGAACGATCTCCGTTCTTCGACAGAGCTAAATACTTTCCTGGATGATGGCAATTCGCCTGTTTTAGCCGCGAAATATGACACTCATCAAGGAAACAAAAGCATCAAATTGTCGAATCATGTCGAGCCGAGCGACACAGCGGAGAAAGTTTTGGTCTTCTTCAAACTTCAACCGGAGGCGATCACACCAGATAACCTTCACCAAAATGTTTTCGTTTCATCGATGCTTTCCTCGCCTGTAAATACCTTGTATCATTCTATACAGAAGGTATTTGCTCCGTTGTTACTTAAGGATGAAAAATGGAGCCGAAATTTTGACCCGAAATTGCAGAGTTTGTTGAGCGAGCTGGAAGCCGGTTTAGGAAGTGTGGTCCGAAAACAAGACAACTCCACTTCTCGAACGGCTAATGTGGGTGATGAAGGTAATGTTGGCGGGATTCTGACGCCGCAAGATGAGTTTCAATATTGGTCTGATGCATCCGTATCAGGGTATGATTTATCTGAAAGGGAACGGGCATCATTTTTCCAAGAAAGTTTTCAAAAAGGAAATGTGTCTCAAGATTTTTCTAATCTTGATGCACTGGACCTTGACGACACCCTGGAACTTCTTGAGTCCACTCAAGATTCACTCGATGAGATCTGGAAACAGGAAGATCACAAGCCTTATTCTGAGACACGCATGAAACATCTTCTGGATGTTATGGCTGGTGCTTTAGCTCGCTACGTCCAACGGAAGCTTGGCATGCTAGACATCTGGCATGACTCTTTTCAGCAGGTTAAAGATGCAATGCGCAAGGGTATTACTGTGTGTGAGAGATGGGTGTCTACGTGCGAGACACTCACTTCACAGTACTGGAAAAGATTTCCTTCTCATCCATGGAGAGGTGAGAAGTTTACCCCAGAAAATTTGTCACAACTGGCTGCAAGACTGGAAGAGGTCTTGACTTTGAGGACAGTTCATGAGCAACTGGTCCGCCTCCTGTCAGTCTCAGAGAGGCAACAATTGCGGACATCAGAAGCCTTTTCTCCTTTCTCTGGCCTTAATCCACTGCACCACAACCCCTACACTGAGCCTCTGTGGAGAGCAGCTGTGATGCAGTATGAGAGAGGAATGGCTCCTGCTGAACAGAAGATAGCTGGCAAACTTAGGCAGCAGCTCAGTGACTTGTCTGCTAAGTCACATCAGcTTTTGAGGGAATTTCAGAGGTACAAGGAGCTTGTCAAAAGGCCAAGCATAAGCAAAGAACTGGCTCCAGAAAGAGAGACTTTGCTTGGCCAGTTGACAGTTTATATAAAGGGTATCCGAGATGACTTCATTTCCAGAACACAGAATTCCTACTCAGGTAATAAAGATGGCAGTGGTCCCCCGCAGGGTAGGAACATGCCTGAGATTGTGAACAACATTGTATGGGTCAGACAGTTGGATTCCAAGGTAAAAGAGACATTGAACACTGCAGAGAGCCTGTTAGGAGATCTGTCAGGCTTTAAGGGCTTCAAGAGAGAAGCATCTGAGTTGACTGAAGAATTACAGTCTTACTGTAAAGATCAGTTTGAGAGTTGGGTCAGTGAAATGATGACATCTATTGATGATCCTAAACAACCTCTCAGtttgcaGACCAGTGGTCATCTGATGGATCTGGATCACAGGGATGGAAAACTAAGAGTGCACTATGGAGACAGGCTTGTGACGCTCATGAGAGAAGTCAGACAGCTCTCAGCTCTGGGATTTGCTGTTCCAGCCAAGATACAACAAACAGCAAGTACAGCCAACAAGTTCTACAGGCATGGAATGATCTTGAAACAGGTTGCACATTTCTATAACACAGTAGACCAACAGATGATTCCAAGCCAGAAGTCTATGATGTTAGACTCAGCTTTAGGGTTTGAACGTCTAGTAAAGAACCCCAAGGCTGGGTCAAAAGAGGGTGGAGGAAAGACACAGGTGACATGGGACAATCCTCCTGAATTGGAGGCCTACATTGACAAGCTACAGGCTGCCGCTGATAAGCTGACTTCAGAGAACAGGAGGCTTCGCAAGTGCCACCATAACATCAGTGACAAGGTAGTGAATCTAATGAGTGTTGATCTGCTCAGACAGCAGCCTCGCTGGAAAGAGGCTCTGGTGTCGTTGAGGGAGATGATGACTTCTCTTGTCCAACAGGTGGGTGCTTCATCAGCACTTGTACAATGA

Transcript

BRAKERRLHT00000021412

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q27802	Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla OX=7673 GN=DYH1B PE=2 SV=2
Q9JJ79	Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1
Q8NCM8	Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC2H1 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002117 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08385 all species →	DHC_N1	Dynein heavy chain, N-terminal region 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR013594 all species →	Domain	Dynein heavy chain, tail	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676 all species →	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005868 all species →	Cellular Component	cytoplasmic dynein complex	Interproscan
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008569 all species →	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0035721 all species →	Biological Process	intraciliary retrograde transport	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0060294 all species →	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0097729 all species →	Cellular Component	9+2 motile cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000021412.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.