Gene detail

Detailed information of BRAKERRLHP00000021433.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3149001.1, unnamed protein product [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000021433

ATGAAGTCTCTAATACAGTTTAGAAAACAAGCCTTaaatgtatacatgtacatgtatgttccaAATGCAGCTCAGTCAACTTGCACCAGTTGTCCTGTTTATAAGGATCTATCCGTAAAATTTTTAGACAAACCTTACTTTAAAACTCATCTTGTGAACACATGCGTTAGTTTGCTTAATGTAACTGGTTATCTACAGATGCTGCTGCCATTGTTCACTCAACTGGATTTCCCTCAGGGAGGAGCTGAAGATGCCAGTGACGTTCCTGAGGTAGCAATATGCACTGTTCTTATTTCACTTCTATCCGATCTTCTGCGGAGTTCATGCACCAGCCAGCAGCAGATGATCCAGTGCCAAGGATTTCTTGTTATCAGTCATGTTTTAGAGAAGGCTGTATCCACCCATCTGACAGAAGACGCTTTGAATATTTTGCTGTCCCTTGCAAGACATCTTTTAAGTTCGACTGGATCTGGTGCACTGTTAGGAAGTCTCTTagatcacattctctttaatCCAAACTTGTGGGTCAAAGCATCTCCTAAGGTTCAGCTTCAACTGTTTAGTGTATTTGCCACAGACCTGGCAACTGGCACAGGGTGTGCAGCTCATCTGCGCCGCGATGTTGGGGTCAGCAGACTTATGTACATGTTAAAGACGTTTTACTGGCTTCCCAGTGATACTGAATTACAACAAGACAATCCGGTACCAACAAAAGAAGAAATCCACTCCCTGAGGGCATTTTTGCTTCTTTTAGTAAAACAGTTAGTACTAAAGGACAAAGGCATCACAGAGGAAGAATTTAAGAGCATTCTGTCCTACCTTATGATAACAGATGAGGAGGAGAATCTATTGGATGTACTTCAACTGGTGCTATCAATAATGAGCGAACAGCCAGACACTTGTATCCCCGTCTTTGACAAAGTTGATGGCCTGAGGGTTTTGTTTCGTTTCATGGACATGAAATCCGAAGCAGTCCGAGTTTATTCTCTGAAGATTGTTGGCTGTTTTCTACAGTTTTGTCCAGCCAGgagaaAGCAGGACTTATTGGAGCActacagtttattttctttgatTGGTGATAAATTTATGAACCACTCTCTGACGCTCACTACCTATAATGTTCTGTTTGAGATCTTGGTCGGACGAGTGTCGAAACAAATAGTCAGCGGACATCACCCACAACCTGACAACACCTTCATTTTACATAACACAACCATGGCTCCTGTCATAGCCAAAATGCTGCGTAAGAACGAAGGAAAACAGTGCAATGCTGGAGTGAAACTAACGCGGCAGGGAAGCTTCAAAGAAGAACGTACACCTGACGATGAGAAGGTCGACCTTAAAAGAAAGTTCCTGTCTGATCTTGTGTTGCTTCTTAACCACAGCAAACTAAACAGAAGCCTTATCCTCCAGTTATCATGTTGGCAAGACTGGCTTTTCGCTTTGGCTCACTTGGAACCATCAAACGCAGAGGAAACCCGAACCACCGATACGGTGTTCTGTTTGTTTCGTATGCTGCTACACCACGCCTTTCAAGAGGAACGGGAAGGCTGGAGGATCTGGGTCGACACTCTGGCTATTTTGCATGGCAAGGTGACTTCATatgaaagagaaaaagaaaagcatACTCATAAACGCGTGGACCTAAGTTCTCGTGCTGCTAAAAACAGCCCAGAACGAAGTAAATCCGTTGATGAAGCTGTAAATTCTACTTCAGAGAAGAACTCTCCCGCATCTAAGTCTACAGACAGTGACATTGACAGAAGGAAGTTTTTCCAGTCGTTACTGCAAAGTAAAAATGATACTCTTCCTAATACCATTCCCGAGGAGAGTGAAAGTGACCCTAAGGCTACTGATGAGGGCAACAAGGGGAGTGCTGTAGAAATGGAGGTTACTAATGAGGGTGACAACGGTGCTGCAGAAATGGAGGCAACGCGGGATTTAACTCCCAGCGAATCTAACGGAGACGAGAAGTTGGAACCTTCTGAGGAAGGGTCTTCTAACGTTGGGGACTCTCTCAGTGTTACTGGGGTAAGCTCCGAGGTGAGAGGATCTGAGGTAGCTGAGGAGCCAGTGGTCCAGGAGGAACCTAATAAAGCACTCAATACTGAGGATGTTAGGGAATCTCAAGAAGAACAATCGAATGTCACGGGAAGTAGTGACAATGAAAAAACCGAGACAGATGCAGCTGAAAATGCAGCAAGTTCGTCTTCAACTGAAAATAAATTAACAGAGAATGACCAAGTTGACAATCGTGATGAATCGGGCGATGATAAACAAACTGAAGCGTCGCCTGAAGTTGAAGAAAGTAACGAAAAGCCACCCGTCAATGAAAGCGAAAGTATCGAAAAATCTGGGAATCGGACAGAAAGCGATTCAGCGCCACCTAAACTAGTAACTGAAAATAACACAAATTCAAAAGAGGGtcaagatttattttacgaGAAAGATAAACCTAAAGATGTTGATAGTAGCCTTACTATTGCAGTGAAAAGCTCTTATATAGGAGCTGCAAGCGAAGTGGGTGAGCATGCGCAATCAAACAACGAAGTTGAAGAGATTGGTGAGCCTGAAAAGAAAGTTACGTCAGAAGATGTTGCTAAGAGTGAGGAACAAATCGTAGCTCAATCGAAAGAAAGCAGTGTTCAAAACCCAAGTATCGAGCCCTTAATTAGTGGTAAGCCAACCCAACCAAGTTCACCTGGCACCCCTAGGGCCGAGTCGAGCCCAACCTCTACTCCTTCTGCCGCGTCCGCAGCCACAAGTAATGCAGACTCGCCCGATCAGAAGTCAACGTACCGAGCACATGTAAATATTCCGGAATACTTGTGGTCGCCTGTTCATCAGAGACTGTTGGGAGATTTATTGTTTGCTATTGAGACTGATGTTCAAGTTTGGAGAAGCCACAATCGTAAAACTGTAATGGATTTCGTCAATGCTAAAGACAATGGCACATATCTGTGGAACCTCGCCCATTTTGTGTCGGTGCTTGCAGATAACGTCATTTTTTGTTGTGGAGATCTCCTGCCCCTGCTCTCCTCCGTCACGTCACGTGATTTCGGCCAAGACGTCATCGAACCGTGTGGCGGTATGACGCTGGAAACGAGTTTCTCTTTCCTGAATCGACTCATGTCTCTCGTAGATGTGATTGTATTTACCAGCTCCCTCGCGTTCAGCGGAGTGGAGACTAACAGGAACTTGAGCACGGGTGGCTTTCTGAGACAGTGTTTGAGATTAGTGTTCTGCTGTGCGGCTCGTAACCGCCTGGTGTGTAGACAGCGGAACAGACCCATTCTGCCGTTGATCACAAGTGGTAAACTGGGTAAGAAGGCGTTAAAGGAAGCGAGGCAGGCAATCAAGACACTGATAGCTTCTACAAAGCCACCTAGCGAGCAGGACATGGTCCAGAACATCCCTGGGCACATGACCACTGTTACGGACCCAGAGAAGTTGCTTCAGGAGATGGATGTGAACCGGCTTCGTGCGGTGGTTTATCGAGACTTTGAGGACAGTAAACAGTCACAGTTCCTGGCCTTAACAGTCGTGTACTTCATTGCTGTTATGATGGTCGCTAAATACAGGGATCTTCTTAAGGCTGAGGACTCTGATGGGAGGTCAAGATTTCACACTGTTGCCAGTCCAGGTCGAGCCATGTCAGAAGGTGAAGTCCAAGGTCTCGATAACCGCTCTCGAGCCGCCAGTTGGGGTGGTCAGCGGAGTGCTTCTGCAGAGGTTGAGGAGGATGTTTTCTCGTGGGACGAAGAATCAAACATTCCCAGTTTGCTCAAGTGCTCGGTAGACTTCAGCCGGTTGAGTTTGTCAGAAAAGTTGGAGGTTGGGTTTAAGTCTTCTGGGTCCCTTCTAAAGGAAATGTTATTGGACTTCAGCCCCTTCCTTAGTCGGATTCTTATTGGGAGTCATGGACAGGAGTTAGTTCTGGAGGGTCTTTCTTGCCAGAAGACAGATTCTATTGTCGAATTGGTTATGCTGTTGTGTTCACAAGAATGGCAGAACTCTCTACAGAGAAATGGAGGAATGGCTTTTATGGAGCTGGTCAACGAAGGCAGGCTTCTTTCACATGCCATGCGCGAACGTATTGTCATGACAACCAGTGAGGCGTTTGTTATCGTAAACAAACTGGATGAAATTTCCCGCCAAAAGCATATGCAGTTCGTTGACCTGTGTCACTTAACTGAGGCCACGTACAGCGAGAATGACAAACTGCAAGATCAGCTGCTGCTTGCTACGAAAAGGAGAGATTTCTCGGTCGCTAAGAATGTCATCCAAAAGGTATTCGATATAATAACCAGTGAACATGGCGCTTGGGCAGCGGAGCAGCAGCCTTCAAATGTAGAATTCTACAGGTTAGACATGTGGGAGGATGACAGTCGTCGACGCATGCGCTTTGTCAAGAACGAGTATGGCTCCAGTCACCCAGAAGCAACTCTGTTGGAAAGCATTGAGGGAGTAAACCAAGATCTCTCGGCAAACCCTCAACATTTAAACTTCGCCAAAATATCCTCCGCCAAGGCTGAGGACTCCTACTCTTTGGACGAAGAAGAAATCGCCGAAATCATCATCGAGGATAGAAACCTGGGACGAGATGTTTCTGGTCACGTGGTGTTCACGAGCGCCTGTCACTTGATTGCTCCATGCGTGGTCGCCCCAGGCTCTTTGACCGTCACGTCTGAGGCTGTGTTCTTTGCTGTGGATGAGGAGAATCCGGAATATCAGAAACTGGACCCAAAGGTGAGTGTTTGCGTGTGA

Transcript

BRAKERRLHT00000021433

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P50851	Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens OX=9606 GN=LRBA PE=1 SV=4
Q9ESE1	Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1
Q9EPN1	Neurobeachin OS=Mus musculus OX=10090 GN=Nbea PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002584 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06469 all species →	DUF1088	Neurobeachin-like, DUF1088	Domain	Interproscan
PF15787 all species →	DUF4704	Neurobeachin/BDCP, DUF4704 alpha solenoid region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010508 all species →	Domain	Neurobeachin-like, DUF1088	Interproscan
IPR050865 all species →	Family	BEACH Domain-Containing	Interproscan
IPR023362 all species →	Domain	PH-BEACH domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR031570 all species →	Domain	Neurobeachin/BDCP, DUF4704	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13743 all species →	BEIGE/BEACH-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0008104 all species →	Biological Process	protein localization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000021433.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.