Gene detail

Detailed information of BRAKERRLHP00000021610.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3168728.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000021610

ATGGTGGGTGATAACCAGTGCCTGTTGCAGTCCCTAAAGGATTCTCCATACTACAAAGGGTTTGAAGACAAAGCATCACTGTGGGAGACTCGATTGGCTGACCTTGATGAGTACCTTCACAATCTAAACCAGATCCAGAGGAAGTGGGTTTATTTGGAGCCCATATTTGGCCGAGGAGCTCTTCCTAGGGAGCAGGGAAGGTTCAAGAGGGTGGACGATGATTTAAGAGCCATCATGAAGGATGTTTCTAATGACAACCGAGTGTTGTCACTAGTTGCTCTGTCAGGCATTCGGAACACATTAGTAACTCTTCTGGATCAGCTGCAGAGATGCCAGAAATCTCTCAACGAGTTCTTGGAGGAAAAACGAGCTCTATTTCCCCGATTTTACTTCATTGGTGATGACGACCTCCTTGAGATCCTTGGCCAAGCAACCAATCCATTGGTGATACAGTCGCACTTGAAGAAACTCTTTGCTGGGATACACAGTGTTGTTTTTGATGAAGGATGTAAAACTATCGTTGCCATGCAGTCTCTGGATGGAGAAGTGGTACCGCTTAAAAGGTCTGTCACCATTACTTCAGAGGTGGAGGTCTGGCTTGGTGATCTTGCCAATGAAATGAAAGACACTCTGAAGCAACTACTGATTGACTGTCTCAGTGCCAGTAAGAAAGGAGGATCAGCAGGAGGAGTTGATCCTTCTAAGTTTCCATCACAGATTCTTTGCCTTGCGGAACAAATCCAGTTCACAGATCGTTGTGAGGCTGCCATTAAAAGCAACTCACTCCAGGAATTTCAGATTGAGATGGAGTTCCAGCTGGAATCATACACCAATGCAGAGATTGGAGGAGGGGATTCCTCTGATTCTGTGTCACATGTTCTGGAATTGAAATTGAGGGCACTGATCTTAGACACGATTCATGCTATTGATGTGGTACAACAGTTGATAAAACATGGCATCAAGTCTGTTGATGATGAGTGGATATGGCAAAAGCAACTGCGATTTTACTTGCAAAAAAATATTTGTTTGATTCGGATGTGTGATGCTGAGTTCCACTACACATATGAATATCAAGGAAATGCTGCCAAACTCGTACACACACCTCTCACGGAAAAGTGCTACCTAACTCTGACACAGGGCATGCACATGGGTCTTGGAGGAAACCCATATGGCCCTGCAGGCACTGGCAAGACAGAATCAGTCAAAGCACTGGGAGGCTTGTTTGGTAGACAAGTTCTTGTGTTCAACTGCGATGAGGGTATTGATGTGAAGTCGATGGGTCGTATCTACATTGGTCTGGTCAAGTGTGGTGCCTGGGGCTGTTTTGATGAGTTCAATCGTCTGGAAGAACCTGTACTGTCTGCTGTGTCCATGCAAATTGAGACCATGCAAAATGCACTCAGGAGCAAACTACCATCCACTAAGCTGCTTGGAAGACAGGTTGATTTAGATCCTAACTCGGGGATCTTCATCACTTTGAACCCGGCTGGCAAGGGTTATGGTGGCCGTCAAAAGCTTCCTGATAATCTAAAGCAGCTATTCCGTCCTGTGGCCATGTCCCGGCCTGATAATGAGCTCATCGCTGAAGTCATCATGTTCTCTGAAGGATTCAAAGAAGCTAAGAGCTTGGGAAGAAAACTGGTGGCCATCTTTAACTTGTCAAAGGAGCTCTTGTCTCAGCAGCAGCATTATGACTGGGGTCTCCGTGCACTGAAGACTGTACTGAGTGGCTGCGGGAACCTGTTACAGTCACACAAACAAACTAATGGACAAGTAAATGCTAAAGTGGAAGCCCGGGTAGTGGTTCAAGCTCTGCGTGTGAACACACCGTCCAAGCTAACATTTGCAGACTCTAAGAGGTTTGATGCCCTTGTTCGAGATATTTTCCCTGGTGTGGACTTTAAAGGAGTAGAGTATGCTGAGCTGGCAGATGCTGTACGCGCTGCTGCCCAGGAATCCAACCTTATTGTCATAGAGACTCAGGTGAAAAAGGCCCTTGAACTGTATGAACAGCTTCGTCAGCGAATGGGTGTAGTGGTCATTGGTCCCTCGGGCTCAGGTAAGAGCACCATCTGGAAACTGCTGCGGTTGGCCCTGGGTAAAGTGAGCCAGACCGTGAGGCATTATACCATGAATCCAAAAGCTATGCCACGAACTCAGTTACTGGGACAGATTGACATGGACACTCGTGAGTGGTCAgacggagttttaacgaatgcTGCTCGCCAAGTAGTTCGTGAACCAATCGATATCCAGTCATGGATCGTCTGTGATGGAGATATTGATCCCGAGTGGATCGAGTCTCTCAACTCTGTGCTTGATGATAACAGATTGCTGACCATGCCCTCTGGTGAAAGGATTCAGTTTGGTCCGAACGTCAACTTCCTGTTTGAATCACATGACCTGAGTTGCGCCTCACCAGCCACTATTTCGCGCATGGGCATGATTTTCCTTAGTGACGAAGACACGGATGTGAAAGCTTTAGTGAAGTCCTGGCTTCAGAGCCAGCCAGAGGAGGACCGTCGTATGCTGGAGACATTCCTAGAGGATCACTTCTACAAGGCCCAAGACTGGGTACTCAAACAGAATGAGTTTGTTGTGGAGACCAGTTTAGTGGGCATGGTCATGAATGGTTTGTCGCACATGTATGGGGTCAAGGTCAAGCAGGAGTTCGCATGCGCATTGATCAGGGGACTGGGTGCTAACCTTTCTCCGACAGCCAAAACTTCTTTTGCTAAAGAAGTGTTTTACTGGACTCACGAGATACCACCTGATCAGAAGAGGCCGCTCGATACCTACTATGACAGTGACAGGGGACGGCTGGCTTCATACCAGCTGGAGGTACCAGACTTACTTGGTGCAAATGACCTCAGCTTGTCCTCAGGCGCTTTGCCAGTTATCCAGACCGCTGATATCAAGAGAGGCCTGGACTTGTTCTCTCCCTGGCTCCATCCAGATCACAAGAAGCCGTTTCTACTAGTCGGCCCTGAGGGTTGTGGCAAAGAAATCTTGCTGAGGCACTGTTTAAAGCAGTTTCGCTCGACCCAGGTAGCTGTGGTCCACTGTAGTGCCCAAACCTCTCCAATGCACGTTCTACAGAAGCTGCAGCAGTCATGTATAGTGATCAGTTCAAATACTGGACGAGTATACCGACCAAAGGACTGCGAGAGATTAGTGTTGTATCTAAAGGACCTTAACCTGCCAAAACCGGATAAGTGGGGAACCAGTCAGCTGATAGCCTTTCTGCAACAGGTGTTGACATACAAGGGATTCTATGACTCAAACCTTGAGTGGGTTGGTCTGGAGGGCGTACAGATTGTAGCGTCCATGAGTGCTGGTACCGGCATGGGAAGACATCGGCTTACCACAAGATTCACATCTATTGTCGGTGTTTGTTCCATAGGCTATGCTGATCGTGACCAGCTGCAGGCAATCTACAGTGCCTACCTACAGCCTCTCCTCAGTGCCTCTCTTAAATCCCATCCAGTGTGGGGTGCGGTAAAAAATGTCCATACTCTAGCGGGCTCCATGGTCTCAGTGTATGAACAGGTACGCTGCACGTTTACCGTGGACGACTACTCTCACTACCTCTTTACCCCACGTGACCTAACAAACTGGATCGTAGGTCTGTTACGGTATAATCTGGACTCGGGGTCTGGGGACAGCTCAACTCAACACCTGCTAGAAATCTGGGCGTACGAGGCCAGGCGACTATTCAGGGATAGACTTGTTGGAAAACAGGGTCTGGACAAGTTTGACAGGTAA

Transcript

BRAKERRLHT00000021610

Protein

Uniprot

Uniprot term	Description
Q27802	Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla OX=7673 GN=DYH1B PE=2 SV=2
Q45VK7	Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync2h1 PE=1 SV=1
Q8NCM8	Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC2H1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21264	DYNC2H1_AAA_dom	Cytoplasmic dynein 2 heavy chain 1, AAA+ ATPase domain	Domain	Interproscan
PF08393	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF12775	AAA_7	P-loop containing dynein motor region	Domain	Interproscan
PF12774	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043157	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049400	Domain	Cytoplasmic dynein 2 heavy chain 1, AAA+ ATPase domain	Interproscan
IPR042228	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan
IPR013602	Domain	Dynein heavy chain, linker	Interproscan
IPR042222	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR026983	Family	Dynein heavy chain	Interproscan
IPR035699	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45703	DYNEIN HEAVY CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan