Gene detail

Detailed information of BRAKERRLHP00000028870.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3197107.1, unnamed protein product [Porites evermanni]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6IPG1	Elongation factor 1-beta OS=Rattus norvegicus OX=10116 GN=Eef1b2 PE=1 SV=1
O70251	Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5
P34826	Elongation factor 1-beta OS=Oryctolagus cuniculus OX=9986 GN=EEF1B PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001854 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10587 all species →	EF-1_beta_acid	Eukaryotic elongation factor 1 beta central acidic region	Domain	Interproscan
PF00736 all species →	EF1_GNE	EF-1 guanine nucleotide exchange domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049720 all species →	Family	Translation elongation factor EF1B, beta/delta subunit	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR014038 all species →	Domain	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	Interproscan
IPR018940 all species →	Domain	Elongation factor 1 beta central acidic region, eukaryote	Interproscan
IPR001326 all species →	Conserved_site	Translation elongation factor EF1B, beta/delta chains, conserved site	Interproscan
IPR014717 all species →	Homologous_superfamily	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Interproscan
IPR036219 all species →	Homologous_superfamily	Translation elongation factor eEF-1beta-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11595 all species →	EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005853 all species →	Cellular Component	eukaryotic translation elongation factor 1 complex	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03232	EEF1B; elongation factor 1-beta	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.