Gene detail

Detailed information of BRAKERRLHP00000030679.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: XP_028413823.1, uncharacterized protein LOC114536670 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000030679

ATGACTGATACAgagaaagcaaaaaatataCGACGTTCCGCCAAGAGCGCGCTAACCCGAGCGCTAAAAGCCGTTTACACGTTGATCAATGCAAAGCGTCCGTCTGAAGAAATTTTGCACGGTTTGGTAGAGGCCAAAGCTACGCATTCGGGTTTGGTGAAGAAGCATGAAGACTTTTGTATGTTCCTTAACGACGAAGAATACGATGAAGCTGAGCAGTGGATGGCAGACTGTACGGATACATATACACGTTTTGCAATTGAAGTTAATGAGTACCAAGAGTGCGCCaaaggagaaaaacaaaagcaagaTGGTAACGTGGAAAGCACCGATTCTACTGATTCTAATGACAATGGGACGATACAAACTGGAGAAGTAATCGTCGTACAGAAGAACGATGAAAATGGAATAGAAGAAGGAGATAGTGCGGCTCTGCACGATAAATCAAATGCAAACAAGCCACTTCTCATGAGACACGAAAAGCCAAAGTTGCCGACTTTCCATGGCGATGTACGtaaatattttatcttcaaAGCCGATTTTCAGCACGCCGTCGAAAATCACTATTCCGAACATTCATGTTTGGGTCCAGAGCCAGCAAAGCTAGTGGATGGGATAAGCAACGATTTAAAGGCCGCCTGGAATTACTTGGACCAAAATTACGGCGATCCTAGGATCGTATCTGACGTGGTCACTGCTGATCTCGAACGATTTAAAGCTATTCAACCTGGTGAAGATCACCAATTCTGTGACCTGGTCAACCTCGTCCGAAGATCATACAACATTCTAAAGGAAGTGAAACGCCCCCAGGACATTGACAACACCCATGTGATATCCTTGATAGAGCGTAAGATGACCAAAGATGATCTGAAAGTTTGGGCGCGCCATATCTACCTTCAAAAATTAGAACCGTCCATGTCAAACCTTCTCAAATGGATGGATAACGAAATGACTGCTCGACTTCGCTCAGGCGCAATGATCCGCAAGACAAGCTCTCAATCCCGCTCATCTGTCAATTCATTGTTTTCTGATGACAGCcccaacagcaacaacaatgcAAGCCACACAAAGGGCCCAACTGATGTCAGCAAGTCCAAAAGCCAGTGCTACGTGTGTAAAGGAACACATTACGTGGACGAATGCCCGAGATTCCAAGGAATGTCAACCAATGAACGATGGGAGGTTGTCAAGGAGCAAAAAGcgtgtttttcttgtttaaaacGAGTGGACCTATCTGACTTTTGGAGAACAGAGTCTATGGGTGTCGCTGTATCACCGTGTACTTGTGAAGCTGCCGAACTGTCAACACAAGAGAGAGAAGAGTTGAAGATAATCGATGAGTCTTACCAGTTGCAAGGAAACATGAAGTATCCTTGGAAAAGAGACCCCTCCAGTCTGCCAAATAATTATCTTCAAGTGCGCAAGAAATTGGAAGCCATCGAGCGACGCCTCGTGAAACATCCAGAGAATGCTAACAGTTATGATAAGCAGATAAAGGAAATGGAAGAAATGCAGGGCATGAAATGGCAGTTTACTACTCCTCTGGCCCCACATCAAAATGGATGTTCGGAAGCCATGGTCAAGACAACAAAGTCCGCCCTCAAGAAAGCCGTTGGAGACGCCGTGCTTACTCCCTTCGAGCTATATACCTGTCTACTTGAAGTCGCAAATTTGGTAAATGAACGACCCATTGGCAGAATACCAAATGATCCCGATGATGGCTCTTATCTGTGCCCCAATGACATCCTGTTAGGCAGAGCAAGCAACAGAGTTCCCCAAGGACCATTTCGCCACACGGAGAATCCACGCCATCGATTCGAGTTCTGTCAAAAGATTGTCGACTCGTTTTGGAAAAAGTGGTCTCGAGATGTCTTCCCTCAACTTGTGCCAAGAAAGAAATGGAATACAGAGAAGAGAAATGTTAAGGTTGACGACTTCGTCATTGTAGCAGACCCCAACGCAGTGCGAGGGAAATGGAACATGGGCAGGATTCTGGAAGTATTTCCAGGAGAAGACGGCCTTGTGAGGAATGTAAAAGTGAAAACCGCAGCAGGCAGTTACATGCGTCCAGTTACCAAGATTTGCGTTATCTACCCAGTTGAAGGCTTTGAAGAGTAG

Transcript

BRAKERRLHT00000030679

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23712	STAC2; SH3 and cysteine-rich domain-containing protein 2	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala