Gene detail

Detailed information of BRAKERRLHP00000032263.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3153361.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000032263

ATGCTGGTTATTCACAAGCTGTTGAGGGAAGGCCATCCAAATGCTTTGAAGGAATCTCTTAAATACAGGCAGATGCTAAAGGATATGAAAGAATTCTGGAATGAGTCAATTCCTGGTACTCTTCGTAACAGTGATGGCGGACCAATCGTGTATTCTGGAACAGATGTTAATGATTATTTTGAATTGTCAGTGGATATATTTGATTACATGGACACACTGGTAGATCTTGAGAAAAGAGTCTTTAGCACACTTGATCCATTCCGTGCAAGTTCTCAGCTCCAGGCGGTGCAGTGTAGGATTTGCCCATTCCCAGTCATCATCCAGGAATGTGGTGGTCTCTATGACATTGTTGTGGATATAATGTATAAACTGCATGCAAGTTTGCCTGCAGACACACTAACTGGACATAGGGACAGGTTTTATTCTCATTTTGCAGAGCTAAAGAAGTTCTTCTTTGATGCTGCAAACATGGCTTATGTGAAAGCTTTGGTGCCTGTTCCTGTGCTGCCCCAGAATCCTCCATCTTTTACATTATCTGACCCCAAGCAAGTACTGGCTAGATCTACAAGTTTTGAAGGACCCCCTCGCAAATCAGTGCCGACAGACGACTTGAAGCGTCAGAGCCTAATGGAACCACTCACTGTTCCCATGACAACAGAACCATTAGTACAAGCAACTCCACAGACTCCAGAAGCTGATATGCTGGGATTAAGCGCAACAGATGGACCCCAGTCTGATAACAGAGACCTAATAATTTATCAGCTACGACAAGAAATAGCACAGTTGAAGCTGGCTCTTGAGCGACGAGAAAGAGAAGCCAAGGCTGTTGAAGATTCTCTCCATTCACAGATAGCAAGAGAAAATGTGTTACTAAGAAAAGACCTTGAGAGTAAAGATGAAGACAAAAAAGATCAAAAAGGTTCATCTGAGGAAAAGTTCACTAAACTgaaaggaatgtatggaaaactgAGGGAAGAACACATCCAGCTTTTAAGAACTGAATTAAGTCAAGTAAATGAAAAACTGCAACAGGAAGTAGATGATAAGTCAACAGAACTTCTGCAAGTCTTTCAAAAAGCAGAAATGGCTGAGCAGGATGGAAAGAGGGCTGAGGGTGAAGTTGGAAGACTGACAGAAAAGCATAATGAGCAGATTTCTTCTCTCATGTCGGAGCTGGAAacattaaaaaaggaaaaaatcgaATCAGAAGAAGCAAGGATAACAGCTGAGGAACAAATTGAATCAATGAGAAAAGATCATGAGGGAAAGATTGCAGCACTTCACGGTGATCTGACAGATGTTCAGAAGGGAAAAACAGACGAAGAAGTCGCTAAGAGAGCAGCAGAGGAAACAATCGaaagggaaagaaaagaaaatgaagaaaagatttcatcccTTAAGGTGGATCTggaaagactaaaaaaagagaagattgaaacagaagaagcaagaaAAACAGCAGAAGAACAAATAGAATCAATGAGAAAAGATAACGAGGAAAAGATGGCAGTGCTTAACAGCAATCTGTCAGATGTTCACAAGAGCAAGACAGATGAAGAGGAAGCGAAAAGAAGAGCTGAAGAAACCAttgaaaaggaaagaaaagaacaCCAAGAAAAGGTGACTGAGCTGGAAAAACAAAGACATGAGGAGCTaatgaaagaaaaacaagatcTAGTTGGCATGGCTATAGAGACAGCGGAAAGAACAATACAAGATGCGTTGGACCAGTTTGCGAATCCAAAACATAACTCAACAACATGCACTGCAGAATATCTGTTGAGCAGAATTGAAAGTCTTCCAGGAGTTGTTGATGAACTTAATGCAAAGTTTACTTCATATCAGCAAGATCACAAAGATGCGGCTCCCTGTGCGTGTTGTCTTGGATCATTCTCACATCAGCTCAGTGAATGTATTCTCAATGCCAAGGCTACCTCACATATGGCTCCTACTCAAGAAGCTACAGATCTTCAGTCGCTTAGTGATTCAGCTGGCAAGGCATCTTTGGACTTGCTGGCACTCTATAAACAAACCAATCCAGATCCAAATGCTATTGCTGATAAagtgaatgctgtaaagaagtATATCATTGACATTACCAAAGTGGCTAAGGTTCTTGCCCCTAAGGAGAAGGATAATATGGACAGTATCGGTGGTGAAGTCGACGATGAGATTAATGCTACTGCTGAGCTTGTTGCAGATTCTGCAGCCAGAATCGAGGAAATGATAAACAAAGCAAGGGAAAAATACAGTGGTGTTCAACTTGAGGTGAACGGAAGaATTCTGGATTCCTGCACTGCATTGATGGAGGCAATCAAGAACTTAATAATGAAGTCTAAAGTTTTACAAAAGGAGATTGTCGATGAAGGCAGGGGCCAAGCTACAGCAAAAGAGTTCTACAAACGCCATCACCGCTGGACGGAGGGACTTATATCAGCAGCTAAGGCAGTTGGATGGGGAGCCAAGGTGCTTGTCGACTCTGCTGATAAAGTTGTCCAAGGACAAGGCAAGTTTGAAGAGATAGTGGTGGCTTCCAATGAAATAACAGCAAGCACAGTTCAGCTGGTAGCAGCATCAAGAGTTAAGGCTCGACAAGCGAGCACTGGATTATCAGGTCTACAGGGCGCCTCTAGGAATGTCGTCGAGTCTGCTGCTGGCGTAGTAGCATCTGCTAAGACAGGCGCTGAAATGATTGAAGACAGCAAAGCAGTTCCAGATTTCTCCAAGCTAACTCTTACGCAGGCAAAGAGATTTGAAATGGAGTCGCAGGTTCGAGTCCTTGAACTTGAGAGTCAGCTAACAAAGGAGCGAAAAAAACTAGGAGATCTGAGGCGAGCGCACTACCAACTCGCCGGAGTGGAGGAAGGACTGGAAACCCAGTAG

Transcript

BRAKERRLHT00000032263

Protein

Uniprot

Uniprot term	Description
O00291	Huntingtin-interacting protein 1 OS=Homo sapiens OX=9606 GN=HIP1 PE=1 SV=5
Q9JKY5	Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2
Q8VD75	Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01608	I_LWEQ	I/LWEQ domain	Family	Interproscan
PF07651	ANTH	ANTH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035964	Homologous_superfamily	I/LWEQ domain superfamily	Interproscan
IPR002558	Domain	I/LWEQ domain	Interproscan
IPR013809	Domain	ENTH domain	Interproscan
IPR030224	Family	Sla2 family	Interproscan
IPR011417	Domain	AP180 N-terminal homology (ANTH) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10407	HUNTINGTIN INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0006897	Biological Process	endocytosis	Interproscan
GO:0006919	Biological Process	obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0030136	Cellular Component	clathrin-coated vesicle	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan
GO:0030479	Cellular Component	actin cortical patch	Interproscan
GO:0032051	Molecular Function	clathrin light chain binding	Interproscan
GO:0035615	Molecular Function	clathrin adaptor activity	Interproscan
GO:0043325	Molecular Function	phosphatidylinositol-3,4-bisphosphate binding	Interproscan
GO:0048268	Biological Process	clathrin coat assembly	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0080025	Molecular Function	phosphatidylinositol-3,5-bisphosphate binding	Interproscan
GO:0005543	Molecular Function	phospholipid binding	Interproscan