Gene detail

Detailed information of BRAKERRLHP00000033557.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3162791.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000033557

ATGAGTCTGTTAGCGGCCTTATTTGGCAGAGCAAATTCTCAGTGTGccggaaaaaatgttttgtgtAAGCTCAACAAACTGGGAAGGTATCAGCTACGCTGGCACTGGTGTGGAAGACATGGAGGAAGGGGCAAACTCGTGTCTACAAGAACGTACCTGCAGATCCTTGGAACCAGCACCGAATACAGCTCACCCAGCGTGCTTCTGTTCACTGACTCTTACAGGTATTTATTTAACTGTGGAGAAAACACTGTAAGAATTCTTCACGAACTAAATCGACTGAAAATGAACATCACCCGGGTCTTCTTGACTGGAATGACTTGGCAAAACCACATAGCTGGTCTTCCTACATTAATCAAATGCCACGAATCATTGAAAGGGAAAGGTTTAACTGTGTATGGACCGGACGGACTTACCAAGTTCCTACAAGATGTCACAACCTTCTCTAGTACTGGCTTGCAAAGGCTGCAATCTCTAAAGCTCTTCAATAGTATAGAGTTTATCACTGATTCATCACAGGAACAGCTTAACCCATACATTGATGACAATGTTACCATCTCACCTGTGGTGTTTGAAAGGGAGGATAAAGATGTGTGCCATTCTGAGAGGCGATCTATTTGCTATATTTGTGAATTTGCAGACCTGCCTGGTCATTTTATTCGTGAAAAAGCTGAAAAACTGGGTGTGACACAGGAATGGTTTAATGAATTAGCTATTGGACACCCAGTGGTGACAGATCAGGGACGAAAGGTTGAACCCTTTGAGGTTCTGTCTTCCACAATCCCAGGACAAGTTTTCATGATTGTGGACTGTCCATCAACTGAAATAAGAGATGGGCTGGTGCAGAGCCTGGAGTTTTCCCAGTTTCAGTGCAATGCAGCTTCCAAGACACCGCATGTTATTGTTCACATAACTCCTCTTGAAATCTTTCATTCTGAATCTTACAAATTATGGAAGGATCAGTTTGGCAAGAAGACTGTTCATATTCTAGTGAACAAAGATGTTGTGAAACAAGAGACTCCATTCTTAAGAAGTGTTGCATTTCAGACTGTACTCTCTGTTGTGGATAATAACATTTTTCCTCCCATAATTGAAAATCCAACACCGAGGGTCCAACATCTCAATTTGCCAGAAAATTGCATCCTGGCAGAGAATTTATTAACTTACCAATTTCGTCCACTAAAAATTGAGGGACTAACAAGAAGAAACCTTCGCATGGGGTATGAGGTTAGTGACATGTTAAAAAGGTTAAGGAAGGCTTCAGAAAAATTGGATGATGGGACTTTTAAAACTGTTGGAACTTCAAGTGTTACCTCAGGAGAGGAAAACTTACAAGCAATGTCTGACTGCAAAGTTACATTTCTTGGAACAGGGTATGCCATACCATCGTACTGCCGAGGTCAAAGTGCAATACTTGTTCATACAGGAGGAGACAGATCAATTCTCTTAGACTGTGGAGAGGGGACATTCTCTCAACTTCGTTGTTTATACAAGGAACGCACAGCAGATGTTGTGGCTTCTCTCAAATGCGTGTTTATATCACACAGACATCCTGACCATCACATGGGGTTGATGAGATTGCTTCTAGAATATGAAAAACTAGCTGATGAAAGACAGCTCAATTTTATCACAATTGTGGGTCCATGGAGATTGCATCAATGGCTGAAGGAGCACTTTAAGTTAATTGGGCGAAATCTGCCAATCAGATTTCTGCCGTTTGGGGAAGTGAAAACCAATAAAGTAAACAACCAAATTCAGGAAGTCCTTGATGCACTGCAACTAAGCAAACTTCAAGTTGTGTCGGTGTTGCACACCCGGGACAGCCATGGAATCATCTTGAATCATTCATCAGGATGGAAACTTGTATACTCTGGTGATTGTGTGCCCTCGTATAATCTCGTCAAAGAAGGtaaaagtgcgacgctgttgaTCCATGAAGCAACTTACTTTGAGATTCCTAAAGATGAACCAATCAGGGGCAGACACTGCACCCTCACAGAGGCGATCAAAGTGAGTCGTGACATGCATGCCAGCTACACCATCCTTACACACTTTTCAAAGCACTGGAAGAATTACTGGCCTCAGGAATGCGGGAATCTCAGGCTAGGACCCGGAATTAGTACGGCTTTTGACTTCATGACGGTTCGATTTAGTGACCTGCCGAGACTTCACAAGCTCAGACCCGCCATTTCAAAAGTCTTCGAGAAAGATACTTCCAACGAAAACGGAGAAACACGTCCGGCGCGTGCATTGTCTGCTCGGGAGAGAAGAATTCTGCGACGAGAACGAAATCAAGAAATTTTCAAACTGTTACTTTGA

Transcript

BRAKERRLHT00000033557

Protein

Uniprot

Uniprot term	Description
Q8HY87	Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis OX=9541 GN=ELAC2 PE=2 SV=1
Q9GL73	Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla OX=9595 GN=ELAC2 PE=2 SV=1
Q9BQ52	Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens OX=9606 GN=ELAC2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13691	Lactamase_B_4	tRNase Z endonuclease	Domain	Interproscan
PF12706	Lactamase_B_2	Beta-lactamase superfamily domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027794	Domain	tRNase Z endonuclease	Interproscan
IPR036866	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR001279	Domain	Metallo-beta-lactamase	Interproscan
IPR047151	Family	Zinc phosphodiesterase ELAC protein 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12553	ZINC PHOSPHODIESTERASE ELAC PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0042781	Molecular Function	3'-tRNA processing endoribonuclease activity	Interproscan
GO:0072684	Biological Process	obsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	Interproscan