Gene detail

Detailed information of BRAKERRLHP00000035227.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3132625.1, unnamed protein product [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000035227

ATGGCTCGGTTAAAGTCACGACCGCTTCAGCGGACAACGAAACGGAAATCTCAAGACCGCGTCCTTCGGGAAAGCTCGCGGTCGTCTTCTACCAAGCGCTTGAGACTTCAAAGCCCATCAGAGCGACAACCGCCTCCGTCTAAGaaagggaaaaagaaaaaagGCAAATCTCTTCTAAAGAAGCCAGAAGATGCACACCTTCCCCCTGAACTACGCAGGGCAGGGCTTATGGCCCACATGCACATCCCAAAGGGGAAGTGTTTTGGCCCATTCAATGGGAGAATTGTGAACAAGGAAAAGTCTCCTGACAAAATGCACTTTTTTGTTTCTGAGGTTGGTGATAACAAAAGGAAATCACATTTTTTCTATGCACACAAGGATGAAAAAGATAAATGTAGCTGGCTTAGTCGCCTTCAAAGTGCAACGTCAGAAAAGAAACAGAATATTGTTGCGTATAACTCTTCCAGCGGCGTCTGCTTTGAGGCTGTCAAAGACATAAAAGCAGGAGAAGAACTTATGGCattgtttgataaaaaatttaaagaaataGCATATCCAGTGTCTGTTGAAAATGCACCTGCCGTTTCCTACATTACGGATGAAACTGGCAGACAAATTGCCGTTGTTCAACTTGATACGGAAGTGGACAAGGCTAAAGTTTATGTTGATCCCACCAATGAAGTAGGGGATGATGAGAAGCAAGCAGACGAGGAGGACGATGATGCATTTGAGGAAGAAGATATGGAAATAgaagatgacgatgatgatgatgattacaAAGAAGACAGTGTTGACGATGggggtgatgatgatgatgatgatgacagaGACACTGAAATGAACAAAAGAAGTactgatgatggtgatggtgttGCTGACGATGCTGCAGGGAAGAGTGGCCAGAAAAAAAAGCGTCAGAAAAAGAAGCCAATCATTAAAGAAGTAACTAGCATTGATGCCGATAGTGGTGCAGATACAACCAAGTACTGCTGCACACATTGTTTGGAAGAATTCATGGAGAAAGAACAGGCACAGGAGCACTCAACATCCAGGGAATGTCTTTCAAAACAGTTCCAATGCACCACATGTACACTGGAGTTTAAAAATGCCTCTTTGCTCCAGAAGCATAAATGTGGAGGAAAACCCAAGTGTTATATCTGTGATGAGGAGTTTGAGGAGCAGACACAGCTTCAAGATCACCAGAATTCACCTCCCGCAGACCATCTACCAAAGTGCGCACAATGTGACGTGCAGTTTCAAAACCTCATGGCAAAGGCTAGTCATGTCCGTTCTAAACACGGGCGGCCTGAGAAACAAGCACAATGCCCCATCTGTCACAAGACTTACCAGAAATCATACCTCAAGGAGCATATTACAAGTCACAATGCAAGCGATGCTCTGAAATGCTCGGAATGCGGAAAGACGTTTTCTTCCAGGAGTAATTTGACCAAGCATCGTAAAAAGCACTTGCCTGGTTATGTTCCAAACACAGTAAGGAATCGTGAGAAGAAATATTGCTGTCTTGAACAAGGTTGCGAGAAAAGGTTCGACTCCAGCAAGGCCTTGGAGAGCCACCTAAGATGCCACACGGGAGAAAGACCGTTTGAATGTGAACAGTGTTCATGGAAGTTTACTCAGAAAACACACCTGACCCGACATATAAAGAGCGTGCATGAGAAGGTCCCAAGGTCACAGCATTCTGAAGGCCGCTCCAATATTCCTGCAACTTGTGAAGTGTGTAACAAAGTATATGTCAACAGTCGTGTGTTGTCAGTCCACGTACAGTCAGTACATGAAGGATTGAGGCCATATAAGTGTGAATATTGTGATGCGACGTATACGCAGCGAGGTCATCTCTGGCGCCACAAGCATGCGAGTCATTTCGAGAAGGATGAAGTCCAGAAGAAATACGCAAGCGACAAGTTTTCCTGCAACTTTGACGAATGCGAACAAACATTCAACACCAAGGCTGAATTAGTCGAACACGTTCAGACACATGTCGGCAATACAGATAAGCCCTGTATGTGCAATGAATGTGGATCGACATTTGTTTCGCAACAAAATCTGGCCAAGCATAGGAAGAGAAGGCACACAGACCATGGTACCGCATCACACAAGGGTCACCGATGTGAAAAGTGTGACAAAATGTTCTTCACGAGTTATCAGCTGGTCGTCCATTTTAGATGCCACACAGGGGAAAAGCCCTATAAATGCGACCTTTGCGGAAAAGATTTTGTTCAAAAGTCTGGCTTGAGGAAACATATCAGGTTTGTGCACAACAAAGAAGAGCGCCCCAAGGAGAAAGAGCGAGAGAAGAAGTTTTTCTGCAGTCTGTGTGGCAAAGCATTCCTGTGTCCCAGCAGCTTGGCCATGCACTGTCGCACGCACTCTGGTGATAAACCCTACACATGTGATAAGTGCGGCCAGGCTTTCGCTCAGGCTGGAAACCTTAAGAAACACTTTAAACGCTGGCATGACGAGGGTGCTGAAGCTAGACTAAGGCGAAGGAAGGTCAAGGGACAAAAATCCACGACAGCAGCAACGCAAGATGAAGCTAGTGATAAATCCCAGGAAAATCGAGCAGCCCAACCAGAAGCAGTAGGCGAGCCCGTCCCCGCGTCCACGCCCGGCTCAGTCCCCGCACCTGCCTCCGCTCCTGCACTTGCACCCGCACCTGCATCTGCGCCTGTGTTCGTGCCCATGCCCGTGCCCGTGCCCAGTCAAACAAGTGTCGGCGACACAACAGAGACGCCAAGTGACATCCAACATGGAAAGACTTCTCAAGCTACGAGTGGTGCTGACACACCAGTCACATCTGCTCTTCCATCTGAGTTAATACCAAGTTCTAGTGCCACTCTGCCAAGCTCTCAGCCAGCCGTATCCGAGATCAGACAAGTGAACTGCACACCTCTGAACACGCCAAGCCATTTCTACGGAACAACACCTCTCAACACAGCCGTCACCAGTTCTCTGAGCGCCGCCGTTACCAGTTCCCTGAATGTCCCCGCCACTCAAAGGATACCTATCCTGTTTGGGTACGTCACCCCAATGGATACCGCAACCATGCAAAGTTCCCAAACATCGGGAGATCCAATGCACCGGAACATTCCAGGGGGACCCTTGAATCTCCCACCCATGCCCTCACAGGGCGGGAACCTGAGCTCTCTGTCCGCACAAGAGCTTCAACAAGTGGTGATTTCTAGAATCCTCGCTGCTGAGAACGCAGAAAACCCGTTCCTGCCTCCAAACGTGTCCGGGATGTCTGCTAATCTTACTCCGAGAGCCCCGGTCCTTCTTCCGCACGTGCATTCCCTTCTTAATCCCCCTGGAGTGAATACCTCAGCGGGGGAGGTGACAGTGTGGCCGTTTTCTCCAAATAGCAGCTTGTTTCAACAGCAATATGAGTAG

Transcript

BRAKERRLHT00000035227

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SVQ8	Zinc finger and BTB domain-containing protein 41 OS=Homo sapiens OX=9606 GN=ZBTB41 PE=1 SV=1
Q811F1	Zinc finger and BTB domain-containing protein 41 OS=Mus musculus OX=10090 GN=Zbtb41 PE=2 SV=4
P60319	Probable transcription factor Ken (Fragment) OS=Drosophila yakuba OX=7245 GN=ken PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003780 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13912 all species →	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23226 all species →	ZINC FINGER AND SCAN DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000035227.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.