Gene detail

Detailed information of BRAKERRLHP00000036541.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3177863.1, unnamed protein product [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000036541

ATGGCGTCGATTTCACCATCGATATTCCACAAAATAGCCAGTGTTTCGGGAGTGCTTGCCATTGCACTAGGAGCTTATGGAGCACATGCTTCATCATTGAATCAAGAAGATGCCAAAAGATTTAAAGAGTCATTCATGACAGGAAACTTGTTCCATCATATTCATAACCTTGCATTACTGGCAGTCCCCTTCGCTAAAAGACCTACCCTGGAGAGGTTGAGTGAAGAACTGTTTTATCATGGAGAGAAAGGAGATATCGAGAAATGCAAAGAATTACTGAATAATGGAGCAGATGTCAACTGGAAAGCTAACAAAAAATTATGGTTCAGAACACCGTTGATGCAAGCAGCCAAATCTGGAATGACAGAAGTATGCCGGCTATATCTAGAACATGGAGCTGATATCAATGCCTTCACAGTGAGTCATTACACAACATTGATCTTAGCAGCCCGTTATGGACACACTGAAACCTGTCAATTCTTGTTATCCAAAGGTGCCAATATCAACAATCAAACAAAGGATGGCGAGACGGCATTGATGTGGGCAGCTGATCATGGTCATCCTGCTACTTGCAAACTGCTCTTGGAAGCTGGAGCCAAGATTGATCTTCAGGATAAGTATGGCATCACAGCACTGATTCGTGCAGCCAAAGGTGGCCATCTTCAAACGTGCATTGTTCTACTGGATTTTGGAGCAGATGTTACTGCTGTTTCCACACTGGGAAACAAGATATGGGATGCTGAGCAGTGggcaaaaatgaacaaacaccaGAGCATTGTGAAGCTGATCCAGAGCTACAAAGTTCGTTGTTCTCTACTCAAAGATGGCTCAGACCCGCCTTCTTACGTCACTTTAAGTGTTTGTGGTGCTGTCAACGCTGGTAAAACAACCCTTATAAGAAACCTGCAACTGACAGCTTCTCAGCGCAGGCGCCATCACGACCAACCAGACACAAGTCAGGATATGGCCTCAAGGACTGCTGGGATTGAAGTTGGCATCATAGATGTGCCTGGCGCGGGCGAGTTCCGCAAAATGGACATGGCAGGTCACTCATGGGCCTTCACAAGTAATGAGTACTTCATTGGAAAGAGGACTTCAATATCCTTGGTGTTGTTTGACTTGAGTAAGACAGACAAGGAAATCGAGAATGACTTGTTTCATTATTTGGGGTGCTTAAAAGCAAGGGAGACGAAATGCGGTGTTCTTCGTTATCGTCCCGAGGTGGTCCTGATTGCCACTCACCCTGATAAGCTGGACACTGATCCACAGCCAAGAGCCAATGCCTATTTCAGGATGGCCATGGATAGCTTTCAAGCTTACATgaatttttatcccaaagtGATGGTGTTGAATTGCACCAACCCAAACGTCCTGGACTTCAATGCATTACGTGAGTGCCTCAAAACACTTCGCGGCAAAATTATCAAGAACTCAGAACTAGTGCCTCGTTTGTGTGCTCAGTTGTTGCCTCGCATTCGTGCGTTGGCAAAAAAGAGGTCCTCATTTCCCGTGGTATCTTGGGAAGAGTTTTTCAGAGAAGTAAAAGAAGTCAACAACGCAGCTGATGAAGAAGGAGTGAGAAACGTGGCCTTTTATCTTAATGAGAGTGCAGAGATCGTGAATGACAATTCACCCGAGCTTCGCGACAAAGTTGTACTAGACGTGAATTGGCTGACGTCCCATATATTTGGAATTGCTCTGGCACCATCCAACTTCCCTCGCTCGCTCCGTTTTGATAGACTCAGCGGCATGGTCGAAAAAGCAGAACTTCAGGCCAGCTTTCCAGAATGCCCTCTTGACCAGCTGATGGAACTGTTTGTTCGTTTTGAGGTGTGTATTCCCTGGGATGAACATAACATTCTCTGTGAAAACTACCTGTTTCCGAGTCATTTGGAACAAGATCGCTCCAATCTTGATGATGTCTGGCCACAGTTTGGTATCAGTGACGCAGGCCTCTGTGTTGTTGGTCGCATTGTTGAATGCAAGAACAAAATGGATGCTTTACCGTGTGGCTTCTTTTCAAAGTTTCAAATCCGGTTGTTGAAACGGTTTGGTCACAAAAGTCCAGTTTGGTATGGCGGCATCAAAATCGCAGACGACGTGGTGGAGATTCTTGTCACGCTCTCCTCGAGTCTTACAGCAGTGAATGTCTGCGTTTGGGCACCAAAGGGATGCGAAGAGCGCTGTTATGCGTCAGTGAAGTTTATTGAAACCCTGATGGAAGGACTACGTAACGAGGTGGCTGGAGGAATCGAGTTTGTGCACAAAGCCATGAGTATAAAGATGCTGCACCAAAAAAGATTCGAGGGATACCTTCTAAAAGACGTGGATGAGGCGTTCAGTCATAAGGGACCTAACGCCAGAGTTGTCCTTGAAAGCTGTGGTGTGAATGAACTGGCGGTGGATGTCAAGTACTGCGGAATCAGGCGATATGTCCATGATCGTGACCATATCAGTCACATGTCACTAAGGGACAGAAAAGAGCTTGCCAAACTGCTGGATACAGATTGTTCATCGAATGTGAGTTCACTGTCAGAGCAGCTGAGAGTCGGATCTGTTCCAGTAGAAAATGAAGACACGGGACCTTCAGGTTTCACCAGTGTTATTTCCGAAAGTGAAACAGATCACTTTCTATCCTTATGCGCTCTTCAGCCTGAGTTAACAGCCACACGCTTGATCGAGGCATTGGAACGCATGAACCGATTCGAAGCTGCTGACGTTGTGAGCAGGTGGCTTTCGAGCATCGATGTACCGGACGACGCCATGTCAATGTACAAAACAAGAGGTGAAAGCGGCGCCTCTGAGAGAAGCTCCTCTGTCAGCTCTCGAAGACGCGGGACAAGTGGAGCGTCAGAACATTGTGAAATGCGCACAAGGAATACAAAAGGAAGTAATGCTTCTGAAGGAAACTCCCTGGGGTCATCACAGCATGGTCCGCTGAGCAGTGCACGGGGACCATGCACATGCGTCTGTTCTCGGCACAGATATGACTCATCCGAACACAGCTTTCCGTTCGGGATGCATCGGGATCTCCCGAGAGGGGAACGTGCTTCTTGGCATGGCAGTGTTCCTGACAATACATACATACAGCGACTGATCAATTCAGAACGAAAAATGCGGAGCACAAGTGACCCATCTGAACACAGCTGCGCATGCTCAGCCGAGGAGTCGTGCTGTGCCGGGTCACTGGGGAGACTTTCCTGTGAGGAATCACAAAATGGTTCAACGGAACAAATTGTTCCCCAACCTCGCTCTCGTGTTATCTTTGAGCCTTGCAGGAACTGCCAACACTGCGCCCCAAAACTGTCCCTGCAAGAAACACAAAATCCCAAACCATGCGATTCAGACCTTGAGTCCACCTTGTCAAGTCCAATCCAAATTTCACGAAATGACGATGAGGGAGCGGAGACTTCGAAAAAGGAATCGCTTCCAACCGCGGAAACTGGCGAACCAGACATGAAGTCACGTTTTCCGCCCAGCAGTCTGGTGTCTGAGCTTTCTTCGCGGTTGAGTCTTAGTTGGAGGCCCGTAGCGTGGGATCTTGGATTTAGAAACTCTGACCTTAGTCGCTTTGAAGAGGCAAGTCTGTTTCGTGATCAAGCGAGTACGATGTTGCATTGTTGGCTATCTAACAACACTTGTACCCTCGAGTGCAAACACTGTGAGCAAGTCATCTTGGAAAGGCTCGGAGAAGCGTTTGAAAACGGTCATCGAACGGATTTGAAGGATTTTTTGGAACACTCCAAAGAAACGTGA

Transcript

BRAKERRLHT00000036541

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4K526	Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011067 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04241 all species →	DUF423	Protein of unknown function (DUF423)	Family	Interproscan
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13606 all species →	Ank_3	Ankyrin repeat	Repeat	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR006696 all species →	Family	Protein of unknown function DUF423	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR039788 all species →	Family	Nucleolar protein 4 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12449 all species →	DEATH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000036541.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.