Gene detail

Detailed information of BRAKERRLHP00000039834.1 in Dendrophyllia cribrosa

Genomic Location: :...
NR annotation: CAH3168929.1, unnamed protein product, partial [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERRLHT00000039834

ATGCTTGCTGAAATTACTGCATTGTTGGCTCTTCTTGTGGCTGTTTATGTCACGTCCACGATCTGGCAAAATCGCCATCTTCCTCCGGGCCCATTTCCATTGCCAGTGCTTGGAAACTTGCTGTCGATTAGTCAGAATACGCCTTATCGTGATCTTGCCAACATGACAAAAACGTACGGCAAACTTTTTCGAATCCAGATGGGACGAAGAAAAGTGATCGTGATCAACAGCTACAAAATCGCCAGAGAAGCGCTCGTGACAAAAGCAAGGGATTTCGCCGGACGACCACCTCATTTCTTTGGCAGCATTTTCGGTCGAGACAACACCGACCTTGCATTTCAAACATATTCTCAGCGGTGGAAAATACAGCACAAAATTGCTGTTGCAGCTTTGCGCTTGACTGAAGACAAAGCCAACATTCCGCTGCACATTGATGAGTTATGCGATACATTTCGTTCTTATAATGGAAAACCATTTTACCCTCGAGATTCCATTTTTACATCTGTGGGTGGCTGTCTTTCGTCCATGATTTTTGGAGAAGAATTTAAATGTAGTGATCGGGAATTAGAAACACTCATACAAGCCATCCATACCTTCGCCAGGTCACTCTCGGCAGCAAACTTGATAGACACGTTTCCATTTTTCAAGCACATCCCTATTGCCATTATAAAGAAAGCAAAGCGTGCCGGagaaaatagagataaaatcttcGAAAAAAAATTTCGAGAGCATGTTTCCACTTTTCAGAAGAACAATATCCGATCGGTAATTGACGCCATGTTAAAGGACTTACGGGAAAACTGTGGCGATTTGGTGACTGAAGAGCATCTAATCTCAAGcgCCTCGGATATTTTTATACCTGGTACTGGAACTCCTTCATCTGTGATCATCTGGATTTTATATTACATCATCAAATACCCGGATATGCAGGCCAGGCTCCATCGCCAATTAGATGACGTAATCGGTAACGCCAACCGTTTGCCAGAATTATCAGACAAACCCAACTTGCCATATTTGGATGCGTTTATTGCTGAAGTGATGCGCAACGTAAGTGAGACTCCACTTTCGGTCCCACACTCGACCATGCGGGACACGTCACTCGCGGGCTTCTTTATCCCGCGGGATATAACCGTGTTTGTTAATCTCTGGGCCATTCATCACGACCCTGATTGCTGGGAGGATCCATTTTGTTTCCGGCCGGACCGGTTCTTGGACGAGCATGGGCGGCTGCAGGTGGAGGGCATCATGCCTTTCTCTGCAGGAAAACGTTCGTGTCCTGGCGAAGCCCTGGCCAGCAGCTGCTCTGAGCCTAATGTGACCCTGGTATCCTGTGGCCCTTACAACTCGTCAAAGGACCAGTGCCTAGGTTGGGGATGCTGTTGGAACTCATCCTCAGATGCAAATACGACGCAGTGTTATGGAATCGCTAATAATCAGACCGCTAGCAATTCAACGAACACTACAAGTGTTCCCTTGACAACTGTTAGGTCCACAACTGCGATGACGACTGCCATGACGTCTCTTGTGACCACAGCTCGTCCTCAAGGCACTTGCGAAGTCTACAGAGGTGAAGTATGTGACGAATGGTTGAACATGACGATGCTGGAATACCGCTTGACGCCGCGATTTCTTGACATCAGGTTTGGACTGAACAGAACTGAGCAAATCATCATTGAGTTCATGAAGGCGATTAACAGAATAGACGGCCAAATCGAATGCAAGCGTCTGTTAAAAATTCTTCTCTGCCAGTACTTTTTGCCGCCATGCAACGATAAAAATGAACGGTACGAGTACTGCAGAGAAGACTGCGAAGCTCTTTTCACCGAATGTAACTCTGCTATGAGGGAAATGCTTGGAGCAGCTAAGTACATTCTGAAAGAGTTAGGATTGGAGTTTGCTCACGTGGGGGTTCCAAATTGCACTAAACTCCGTTTTTCTAAAACCTACAAGGCAAAGAACACCACATGTATTCACTGGGGACTGTTCAATATCACTTCATCCCCTTATCCTTCAACCAAGCCTTATCCTTCAACCAAGCCGTCGAAAAAGTCCCTCATTGTTGGCGCTGTAGTTGGAAGTATTGTTTTTCTCATCATTATCGCCATAGTCGTCGTTTGTAAAAGGCGCAAAAACCCGCTGAAAGCAGGGAAAGGTTTCGAAGGCGTCACTTTTACAGCCGTATCCATGAGAGACAGGATAAGAGCCGAGTCCATGCGCGCCCTGGACGAAAGCAAAGTCCTGAGCCTGTTTAATCCGGATGACATCAGACAATATCCGCTCAGCTGCATAGAGTACATCCGGGACCTTGGATCAGGGAACTTTGGTTTGGTCTTCTTAGGAAAGGCGTACGGTCTAATCGATGGCAAAGAAGACTCCGAGTTATTAGTTGCCGTCAAAACCATCAAAGAAGGCAGCTCCACTGAAACCAAGGAAGACTTTTTCAAGGAAGTAGCGTTGATGTCTCTTCTCCATCATGAGAACATTGTTGAGTTGTTAGCTGTTTCAACAGAAGAGGAACCTTATGGAATGATATTCGAGTTCATGGAATTAGGGGATCTTAATCAGTTCCTTAGGAAGGCTGGTCCTTTCTTCGAGGGAGACGAGAAAGAAAGAGTCATTCTGACGCAAGACGACCTTCTTTCAATCTCATTACAATGCGCCTATGGTATGGAACATCTTCAGACGCTCAGGTTTGTCCACAGAGATGTGGCTACACGAAACTGCCTCGTGGGTACGGGCATGGTTGTTAAGATCTCCGACTTTGGAATGTCAAGGGATATCTATGCTTCGGACTATTACAAGGTGGAAGGACAAGCTGTATTGCCCATCCGATGGATGCCTCCAGAGGCTTTGTTGTTGGGAAAATTTACAGTGGAGTCCGACATTTACTCATTTGGTGTTCTCCTTTGGGAAATCTACACCATGGCCCTACAGCCGTACTACGGATACACGAATGAAGAAGTTGTTGCATTTATCAAAAAGGGTGTGCACCTAGGACAGCCAGAGGATTGTCCCGATCACGTGTACCAAGTAATGAAGAGCTGTTGGCACAAAGAAGCTTCACAGAGACCAAACTTCACTCTAATGATAGCTCAGCTCAAACAGGAGGTGACGTCACAATACGACTCCGCGTCGCCAGCTGAATCACCAGTCCACGATAAACAACCGCTGTACCAAAACATTGGTGTTACTCCGGAATTGGTAAAAAAAGAGGTCGCTGTGGTAAACCAGCCTACTGGACGCAAAATTTCCCAGCAAGCAACAGACACCCCTGAGAGCGTCACAATCTCAACCCCTGGTTATATGAATGTCAGTTGTAATTCCGGTTATGTTAACAGCGATGAAGAGGAAATGGGTATCGAGGAAGCAGTTGTGTAA

Transcript

BRAKERRLHT00000039834

Protein

Uniprot

Uniprot term	Description
Q92095	Cytochrome P450 1A1 OS=Opsanus tau OX=8068 GN=cyp1a1 PE=2 SV=1
O42430	Cytochrome P450 1A1 OS=Limanda limanda OX=27771 GN=cyp1a1 PE=2 SV=1
Q9YH64	Cytochrome P450 1A1 OS=Platichthys flesus OX=8260 GN=cyp1a1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan
PF00088	Trefoil	Trefoil (P-type) domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF01392	Fz	Fz domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan
IPR000519	Domain	P-type trefoil domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR044913	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0010976	Biological Process	positive regulation of neuron projection development	Interproscan
GO:0014068	Biological Process	obsolete positive regulation of phosphatidylinositol 3-kinase signaling	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan