Detailed information of BRAKERRLHP00000044273.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: KAJ7388913.1, hypothetical protein OS493_035061 [Desmophyllum pertusum]
Species Dendrophyllia cribrosa · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001705 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07676
all species →		PD40WD40-like Beta Propeller RepeatRepeatInterproscan
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF07525
all species →		SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR001496
all species →		DomainSOCS box domainInterproscan
IPR011659
all species →		RepeatWD40-like beta propellerInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036036
all species →		Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR051983
all species →		FamilyWD repeat and SOCS box domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15622
all species →		WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0035556
all species →		Biological Processintracellular signal transductionInterproscan
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERRLHP00000044273.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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