Gene detail

Detailed information of BRAKERRLHP00000044676.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3036449.1, unnamed protein product [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000044676

ATGGGccaaaaagataaaaagaaagaaTCAACTGGTTCCGATAACAGCAATGTCTTCCTTCAAGTTCCCGGCACGCAGATAGCGGACGATGGTGATATTCCCCTTGTTTTGGTAAACAACGGAGCAGCGCCGGGAGACGTACGTGAAAGAAAACGATCACGTGCCATAAGCAAGGTGTCCATGACTTCTGACGATGGAGCCGAAGAGAGCGAGAAAGGACAGTTTACGGGTCAGAAGTCAACAATGCTTCACCAGCTGATTTTGAATGGAGATGTAGAGGAAGTCGAAAAACTCTTATCCAAGGGCACGAGCGTTAACAACAAGGACAAGTCAGGCAAAACTCCCCTTCACACCGCCATCCTCTCAAAACAGTTCACAGTTGTCGACAGGTTACTTGAGTGCGGTGCTGACGTCACTTTAACTGATGACGCGGGAGATACACCTCTACACACAGCCATTCATGTTGGCAGTGAGAAACTAGTACTGACTCTTCTTCATCAGGGTCGCGCAGACGCAAACGCTCTCGGTCGTAACTCGTGCACGCCACTGCATCTTGCTGCTGAGATGGACAATGATAACGTTTGTAAAATACTGGTTGAAAATTCTGGAAACCCCAAGAGCTTGGATGATGACAGAATGACACCAGTGGCTCACGCCATAGAAAGAGGTGCTAAGAAATCCGCGGCATTTCTGCTTCAACACGCCAACGGGCAAGGGATAGTTGAAGACTTCTTATATGACGTTGACATTGATGGCAACTGTCTTCTACACCTTGCCGTGAACAGCGGTGTTCTTGCGGTCGTCGAGCTTTGCATTGAATATGGAGTAAGAATTAGACAACCCAGGAGAATTGACAAGGTAACACCATTTCATATGGCTTGCGAGTTAGGATCGATGCCGATAGTGGAATATCTGGTCGGTAAAGACCCCGCGGTCTGTAGGATAACCCTTGTTGACTTCAGAGGCAGAACACCACTACACTTGGCCGCCAGTAAAAACCGCTTCCATGTCGTCGAGTTTCTTCTTGAACAAGGGGCCGCTGTTGATCCTAAGTCAGACGACAGGCATACTCCGTTGTTCCGCGCCGCTGACACCGGCGCCGTTGATGTTGTTAAACTCCTTATGGAACGTGGCGCTGACGTCACCATCCGGGACATTGAGCTGCAGTCTGTGTTGCATGCAGCTGTGGGTCATCCTCGTGCAATGGAAGCCCTTCTTCAGAGTCCTGCTGTCATGTCACTCATCACTGAGAAAGATGTAAACGGCTACTCTGCTGTTCATTATGCAGCCAAGAAAGGAGACATCAAGAACGTAGAACTTTTCGTGGCCAAAAACAAGACAGCTGCAAGTGTGACGTCAGATTCATTGGATACGCCCATCCACGTGGCAGCTAAATATGGATGGAGTGAAGCAGTGGTAACGCTTATGGATCGACAGAACGCACGGATATTAAACCTACAGAACAGCCAGGGAAGAACTCCTCTACATTACGCATGCTCAGAGGGACATGATCTTACAACTGAAGCGCTTATAAAGCTGGGGGCGATAGTAGAAAGAGATCAAAGTGAACGCTCTCCTCTTCATTTGGCTGCTCTCAAAGGATCCGTCAGATGCTGTGAGGCCATCATTGAGAAATTCGATGATTGCGTTAACTGGGCAGACAAAAATAAGAACACCGCCTTGCATCTAGCAGCCATCAATGGTCACGCTCCTGTCGTGACATTACTGCTCTCTAATGCACACTCCGAAGTCACGTTCAACAACACAAACGATAACATCCTTGATGCGGCTCTGAAAGAAAAGAAGAGTGCTGTTGTCATGGCGATCGCTGAACACGACAGATGGAAAGAGGTCCTGACCACGTGTACTACAGGCGTGGTTACAACGCTGCAAAAACTGGTAGAAATCATGCCTGACACTGTTGTGCGCTTCTTGGATCAGCTCATTACTGAGACTGGAGATCCATCCAGTCAGAATTACAAGGTTACATATGACTTGGGTCTGATTCAAGGAAAATACGAAGAAACAGAGGTCAAAGGACGAAAACGAGTCACGGATTCTGGAGAAAAGGTATAA

Transcript

BRAKERRLHT00000044676

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BLA8	Transient receptor potential cation channel subfamily A member 1 OS=Mus musculus OX=10090 GN=Trpa1 PE=1 SV=1
Q6RI86	Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Trpa1 PE=1 SV=2
Q6KAE5	Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS32 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000271 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24198 all species →	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000044676.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.