Gene detail

Detailed information of BRAKERRLHP00000045805.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: CAH3113446.1, unnamed protein product [Porites lobata]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

BRAKERRLHT00000045805

ATGAGTACAGCAAAGCGAAAGAAGCGCAGTTCGAGccTCAAGGGTTCTCTTAATCCTTCCAAACGGCATCGTGACCGCTTCAATATTGAGTTGGATAACCTAGCAAAGCTGCTTCCCTTCCCACATGATGTAATCCAGAAATTGGACAAGCTCTCTATTTTGAGACTCTCTGCTAGCTATCTCAGAGCAAAGAACTTCTTTAAAGGCCAACAGTGGTCAGAAGATAACCAAGTTGGAAAACTTGCCGATGGTCACACAGATTTTGAGGGCAATGGAGTGTTTTCTAAACTTCTTTTAGATGCATTAGATGGATTTGTCATTGTATTAACAAGAGATTTTGAGGTGTTCTATGCTTCTGAAACTGTTCAGGATTACTTAGGACTTGCACAGGCCAGTGTTATTCATCAAGATTTCCTGAGGTTTATACATGTGGATGATCATGACCTTATCAGAAAAAATCTTCAACCTTTCCCTGAAGATGAGGAGCAAAAAATTAGAATTCTTGATGAAGAAAATGATGGGACAGTCTCTGAAACTGGTAGTACTTGCAGTGGAGATGACAGTAGCAAAAGTGGGGAAGATGTTGAGACAGAAAGATCTTTTGTATGCAGAATGAAATGCATTCTCAACACCAGTGCTGGCTTTTTCAAGCCATTCAGATGTAGTGGACGTTTGCGTGAGATGACCCTCCCTGACAGTGAGAGACGGGAATATGGTCTCTTCCTTGTCTGTACTCCACTCGAAACTGTGTCATCGTCAATGCTTGAAATCAGGTTAAAAACGTCCCTTTTCTGCACCAAGAACAGAATGGACCTGAGTTTTATGGACCTCGATCAAAAGGGCCGATCTTTACTTGGCTATCACAAGAGAGATATAGCTCTGCAGTCAAGTTATTGCATGATTCATTTTGATGACATCCCTGTGCTCCAGACACTTCATAGTGACTTGATGAGCGCTGGAAAATGTCAGGGGACTTTCCGCATGCTGAATAAGAACCTCAAATGGCAGTGGCTGACAGGAACAGCACAGGTGGTATTCAAGGGAAATGAGCCTGACTTTATCATCACAACAAACAGGCCTCTAAGTGATGAGGAAGGTGAAGAAATATTGAGACAAAGAGGGCAGTTCCCTGTGCTGCCTTTTACAGCAAGCGACTGTGGATCACCTAGTCCAAGAAGCCCCAGAAGTCCCAACAGCCTCAGTAGCTATAGCAACGGGGGCAGTCCACAGGCAGTCCCATGGGATAGTTTCTCTGCCACAAATAGGACAGGCTTTAAATTTCCAAACATGTCTTCAAAGTATCCAAATAATGGTAGGGTGAACAAGAAGAAGCCCCAACACATTTCTGATGTCATGGCCAAGTCACCTGCAAGTGGTTCAACTTCCCCAAAACAGGAAGATCTGCCCCCCTCACCACAGCACCCTGGGTCCCCATTTCCTGACGCCCTCTTAAGCTCTACCTCTTGTACTTCTGCACCCCTGTCTCCACCCCTGCTGGACTTGGGTGTAGATATACAAGCAGAGCTTGAAAAGGATGCTCCTGAGCTAGACTTCATGCTTCTTGACCCACAAGATCTGACATTAGATAATCTTCATCTTGAACCACTTGAGAATTTGGATGAAGTGTCATCATCCATGTCGCTGTTGGCTGTTGATCCACCAACTTATGAAGAAGCAATACGTCTTACTGCAGACTATCTTTCAAGTTCATGTAGTGAGAGCACTGGAATGACAAGCCCCGATGGAAGCCAACCCTCATTATCTCAAAGCCCACCAAAAGGGAATCTTGAACATTTCCCCCCTTCATCACCCTACCCCTCCCCTGGACATCCTGCATCGCATATGTCGCCTGGTGGTTTGCCAACACCAGACCCTTCCCCCATTGGTAATCGAAATCCTTCAACGGCAAGTGTGAACATCTCCTGGCAGGGGATAGGACAAATGAAGGTCTCCCCTCAACCTCAACAGCACTGCCCACCTCAGCAGACTCTTCCACCATATTCAACCATCCCATCGCCACAGCCTCCTATACAAGTTCAAAGTAAATCGGCAAGAATTTCAGCTACGATAAAAAAGATAGAGAAGATTGATATGTATGGCCAGAGCTGTGTGTCAGGACAGTCTCCTAACCCAATGACAAGCCCCAGAGGAATGCAAAACATGCCTGGAAACtggcagcaacaacaacaacaaccatcAATGCCACAGCAACCACTGCCACAGAGAAACATGCCGGCGCAGCCAGGCTATGAGTGGAAAGCCCCACAACAAATACATAATCAAATGCaaaattttgttggagaaagAACTGCCTCAGCCTTGGGATCAGAAAACCCAATATATGCTACAAATATGCAAGGGAGGAGTTGGGACACTGTCATGGTGCCACCTCTGTTTGAGGACACAGTGCCAACCCTCGAGTATGAAGGTGGGGTGGGGTACATGAAGACTGGACAACATGTTGATGTTCATCTTCAACACCATGGTGTGGACCCCTCTATTTTATCACCCCCTTATCAAGAGGACTTCCATTCAGGATTTGGGTTTCAAGGGAATCCGTTACCTGCGATGAGTCAAGGGCAAACCACACTTGGGCACTGGTGA

Transcript

BRAKERRLHT00000045805

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q95LD9	Aryl hydrocarbon receptor OS=Delphinapterus leucas OX=9749 GN=AHR PE=2 SV=1
P35869	Aryl hydrocarbon receptor OS=Homo sapiens OX=9606 GN=AHR PE=1 SV=2
Q8R4S6	Aryl hydrocarbon receptor OS=Mus musculus castaneus OX=10091 GN=Ahr PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003728 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08447 all species →	PAS_3	PAS fold	Domain	Interproscan
PF00010 all species →	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan
PF00989 all species →	PAS	PAS fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013655 all species →	Domain	PAS fold-3	Interproscan
IPR000014 all species →	Domain	PAS domain	Interproscan
IPR011598 all species →	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638 all species →	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR035965 all species →	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR013767 all species →	Domain	PAS fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23043 all species →	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09093	AHR; aryl hydrocarbon receptor	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.